Return to main results Retrieve Phyre Job Id

Job DescriptionP52052
Confidence98.09%DateThu Jan 5 12:05:02 GMT 2012
Rank23Aligned Residues87
% Identity17%Templatec2r65A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:cell division protease ftsh homolog; PDBTitle: crystal structure of helicobacter pylori atp dependent protease, ftsh2 adp complex
Resolution3.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   102.......110........ .120.........130.........140.........150.........160....
Predicted Secondary structure 




.................





















Query SS confidence 
















. . . . . . . . . . . . . . . . .













































Query Sequence  QLEQLGAPTVLPELLKS. . . . . . . . . . . . . . . . . ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYA
Query Conservation   
  

    
      .................  




 
 








 


          
 




 
    
Alig confidence 
















.................

























....















Template Conservation     

 
    
  
   
            
      


 
 





 

 


   ....                
Template Sequence  RFKDMAGNEEAKEEVVEIVDFLKYPERYANLGAKIPKGVLLVGPPGTGKTLLAKAVAGEA. . . . HVPFFSMGGSSFIEMF
Template Known Secondary structure 
GGGS
S
TTS
TTT



S

SSSSS....T


TGGGGS

Template Predicted Secondary structure 

















....












Template SS confidence 















































































   168.170.........180.........190.........200.........210.........220....... ..230.........240...
 
   165....170.........180.........190.........200..
Predicted Secondary structure 


















Query SS confidence 





































Query Sequence  SQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGEL
Query Conservation             
         
   

  

 
 



Alig confidence 
..........


























Template Conservation   ..........      
      
    
 

 



Template Sequence  V. . . . . . . . . . GLGASRVRDLFETAKKQAPSIIFIDEI
Template Known Secondary structure  S..........SS
STTT
STTG
Template Predicted Secondary structure  ..........





Template SS confidence 





































   244 .....250.........260.........270.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions