Job Description P52052 Confidence 97.07% Date Thu Jan 5 12:05:02 GMT 2012 Rank 186 Aligned Residues 139 % Identity 14% Template c1xxhB_ PDB info PDB header:transferase Chain: B: PDB Molecule:dna polymerase iii subunit gamma; PDBTitle: atpgs bound e. coli clamp loader complex Resolution 3.45 Å

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		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.							120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.				.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.																												.																		.	.	.
Query SS confidence																								.	.	.	.	.	.																												.																		.	.	.
Query Sequence		S	H	C	P	Q	L	E	Q	L	G	A	P	T	V	L	P	E	L	L	K	S	E	.	.	.	.	.	.	N	G	L	I	L	V	T	G	A	T	G	S	G	K	S	T	T	L	A	A	M	V	G	Y	L	N	Q	.	H	A	D	A	H	I	L	T	L	E	D	P	V	E	Y	L	Y	.	.	.	A	S	Q	R
Query Conservation																								.	.	.	.	.	.																												.																		.	.	.
Alig confidence																								.	.	.	.	.	.																												.																		.	.	.
Template Conservation
Template Sequence		W	R	P	Q	T	F	A	D	V	V	G	Q	E	H	V	L	T	A	L	A	N	G	L	S	L	G	R	I	H	H	A	Y	L	F	S	G	T	R	G	V	G	K	T	S	I	A	R	L	L	A	K	G	L	N	C	E	T	G	I	T	A	T	P	C	G	V	C	D	N	C	R	E	I	E	Q	G	R	F	V	D
Template Known Secondary structure		T			S	S	G	G	G			S														T	T				S							S	T	T	S	S													S		T	T		S		S	S			S		S									T			T	T
Template Predicted Secondary structure
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.					190	.	.	.	.	.	.	.	.	.	200	.	.	.			.	.	.	.	.	.	210	.	.	.	.	.	.	.			.	.			220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.															.	.															.	.			.	.
Query SS confidence																								.	.	.	.															.	.															.	.			.	.
Query Sequence		C	L	I	Q	Q	R	E	I	G	L	H	C	M	T	F	A	S	G	L	R	A	A	.	.	.	.	L	R	E	D	P	D	V	I	L	L	G	E	L	R	.	.	D	S	E	T	I	R	L	A	L	T	A	A	E	T	.	.	G	H	.	.	L	V	L	A	T	L	H	T	R	G	A	A	Q	A	V	E	R
Query Conservation																								.	.	.	.															.	.															.	.			.	.
Alig confidence																								.	.	.	.															.	.															.	.			.	.
Template Conservation
Template Sequence		L	I	E	I	D	A	A	S	R	T	K	V	E	D	T	R	D	L	L	D	N	V	Q	Y	A	P	A	R	G	R	F	K	V	Y	L	I	D	E	V	H	M	L	S	R	H	S	F	N	A	L	L	K	T	L	E	E	P	P	E	H	V	K	F	L	L	A	T	T	D	P	Q	K	L	P	V	T	I	L	S
Template Known Secondary structure							S	S		S	T	T	T	T								T				S		S	S	S	S								T	G	G	G															S			T	T								S		T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions