Job Description P52052 Confidence 98.27% Date Thu Jan 5 12:05:02 GMT 2012 Rank 14 Aligned Residues 129 % Identity 19% Template c1u9iA_ PDB info PDB header:circadian clock protein Chain: A: PDB Molecule:kaic; PDBTitle: crystal structure of circadian clock protein kaic with phosphorylation2 sites Resolution 2.80 Å

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		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.				.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.			.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																	.	.	.																																				.	.																								.	.
Query SS confidence																	.	.	.																																				.	.																								.	.
Query Sequence		A	L	R	L	L	P	S	H	C	P	Q	L	E	Q	L	.	.	.	G	A	P	T	V	L	P	E	L	L	K	S	E	N	G	L	I	L	V	T	G	A	T	G	S	G	K	S	T	T	L	A	A	M	V	.	.	G	Y	L	N	Q	H	A	D	A	H	I	L	T	L	E	D	P	V	E	Y	L	Y	A	.	.
Query Conservation																	.	.	.																																				.	.																								.	.
Alig confidence																	.	.	.				.	.	.	.	.	.	.	.	.																								.	.																								.	.
Template Conservation																							.	.	.	.	.	.	.	.	.
Template Sequence		A	I	A	K	M	R	T	M	I	E	G	F	D	D	I	S	H	G	G	L	P	.	.	.	.	.	.	.	.	.	I	G	R	S	T	L	V	S	G	T	S	G	T	G	K	T	L	F	S	I	Q	F	L	Y	N	G	I	I	E	F	D	E	P	G	V	F	V	T	F	E	E	T	P	Q	D	I	I	K	N	A
Template Known Secondary structure		S									T	T					T	T	S	S			.	.	.	.	.	.	.	.	.	T	T	S							S	T	T	S	S																									S	S	S
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.										.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
														165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.											.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.													.	.	.	.	210
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	S	Q	R	C	L	I	Q	Q	R	E	I	G	L	H	C	M	T	.	.	.	.	.	.	.	.	.	.	F	A	S	G	L	R	A	A	L	R	E	D	P	D	V	I	L	L	G	E	L	R	D	S	.	.	.	.	.	.	.	.	.	.	.	.	E	T	I	R	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	S	F	G	W	D	L	A	K	L	V	D	E	G	K	L	F	I	L	D	A	S	P	D	P	E	G	Q	E	V	V	G	G	F	D	L	S	A	L	I	E	R	I	N	Y	A	I	Q	K	Y	R	A	R	R	V	S	I	D	S	V	T	S	V	F	Q	Q	Y	D	A	S	S	V	V	R	R	E	L	F	R	L
Template Known Secondary structure		G	G	G	T									T	T	S										S	S			S			S	S																		T		S							S	T	T	T	S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	T	A	A	E	T	G	H	L	V	L	A	T	L	H	T	R	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	A	R	L	K	Q	I	G	A	T	T	V	M	T	T	E	R	I	E
Template Known Secondary structure									T										S	S
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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