 |
Job Description | P52052 | Confidence | 97.64% | Date | Thu Jan 5 12:05:02 GMT 2012 |
Rank | 63 | Aligned Residues | 97 |
% Identity | 23% | Template | c1r6bX_ |
PDB info |
PDB header:hydrolase | Chain: X: PDB Molecule:clpa protein; |
PDBTitle: high resolution crystal structure of clpa
|
Resolution | 2.25 Å |
|
 |
  |   |
117 | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | |
. |
Predicted Secondary structure |   |
 |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
| . |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
Query Sequence |   |
K | S | E | N | G | L | I | L | V | T | G | A | T | G | S | G | K | S | T | T | L | A | A | M | V | G | Y | L | N | Q | H | A | D | A | H | I | L | T | L | E | D | P | V | E | Y | L | Y | A | S | Q | R | C | L | I | Q | Q | R | E | I | G | L | H | C | M | T | F | A | S | G | L | R | A | A | L | R | E | D | P | . |
D |
Query Conservation |   |
  |   |   |   |
|
|
|
|
|   |
|   |
|
|
|
|
|
|
|
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |
| . |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
Template Conservation |   |
  |   |   |   |   |   |   |
|
|   |
|
|
|
|   |
|
|
|   |
|
|   |   |
|
|   |   |
|   |   |   | . | . | . | . | . |
|   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
H | K | P | V | G | S | F | L | F | A | G | P | T | G | V | G | K | T | E | V | T | V | Q | L | S | K | A | L | G | I | E | . |
. |
. |
. |
. |
L | L | R | F | D | M | S | E | Y | M | E | R | H | T | V | S | R | L | I | G | A | P | P | G | Y | V | G | F | D | Q | G | G | L | L | T | D | A | V | I | K | H | P | H | A |
Template Known Secondary structure |   |
T | S |
| S |  |  |  |  |  |  |
| S | T | T | S | S |  |  |  |  |  |  |  |  |  |  |  |  | T |
|  | . | . | . | . | . |  |  |  |  |  | G | G | G |
| S | S | S | S |
|
| S | S | S |
|
|
|
| S |
| S |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |
| S | S |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
485 | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | |
|
|
|
|
. | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . |
  |
  |   |
196 | . | . | . | 200 | . | . | . | |
|
. | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
| . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | I | L | L | G | E | L | R | . |
. |
D | S | E | T | I | R | L | A | L | T | A | A | E | T | G |
Query Conservation |   |
  |
|   |
|
|
|
|
| . | . |
|   |
|
|
|   |   |
|   |   |
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|
|
|
|   |   |   |   |   |
|   |   |   |
|   |   |   |
|
|   |
|
Template Sequence |   |
V | L | L | L | D | E | I | E | K | A | H | P | D | V | F | N | I | L | L | Q | V | M | D | N | G |
Template Known Secondary structure |   |
 |  |  |  |  | T | G | G | G | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | S |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|