 |
Job Description | P52052 | Confidence | 97.68% | Date | Thu Jan 5 12:05:02 GMT 2012 |
Rank | 57 | Aligned Residues | 88 |
% Identity | 26% | Template | c1qvrB_ |
PDB info |
PDB header:chaperone | Chain: B: PDB Molecule:clpb protein; |
PDBTitle: crystal structure analysis of clpb
|
Resolution | 3.00 Å |
|
 |
  |   |
118 | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | E | N | G | L | I | L | V | T | G | A | T | G | S | G | K | S | T | T | L | A | A | M | V | G | Y | L | N | Q | H | A | D | A | H | I | L | T | L | E | D | P | V | E | Y | L | Y | A | S | Q | R | C | L | I | Q | Q | R | E | I | G | L | H | C | M | T | F | A | S | G | L | R | A | A | L | R | E | D | P | D | V | I |
Query Conservation |   |
  |   |   |
|
|
|
|
|   |
|   |
|
|
|
|
|
|
|
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |   |   |
|
|   |
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|   |   |
|   |   |   |   |   |   |   |
|   |   |
|
|
| . | . |
|   |   |   |   |   |   |   |   |   |
|   | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |
|   |   |
|   |   |
|   |   |
|
|
Template Sequence |   |
R | P | I | G | S | F | L | F | L | G | P | T | G | V | G | K | T | E | L | A | K | T | L | A | A | T | L | F | D | T | E | E | A | M | I | R | I | D | M | T | . |
. |
E | Y | M | E | K | H | A | V | S | R | L | Q | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | T | E | A | V | R | R | R | P | Y | S | V | I |
Template Known Secondary structure |   |
S |
| S |  |  |  |  |  | B | S | S | S | S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S | G | G | G |  |  |  |  |
| T | T | . | . | T |
|
| S | S | G | G | G | G | G |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
| S | S |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|  | . | . |  |
|
|
|
|  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
586 | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | |
|
. | . | . | . | 630 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | . | 640 | . | . | . | . | . | . | . | . | . | 650 |
  |
  |   |
198 | . | 200 | . | . | . | |
|
. | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 |
Predicted Secondary structure |   |
 |  |
|
|
|
| . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | L | G | E | L | R | . |
. |
D | S | E | T | I | R | L | A | L | T | A | A | E | T | G | H | L |
Query Conservation |   |
  |
|
|
|
|
| . | . |
|   |
|
|
|   |   |
|   |   |
|
|   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|
|
|   |   |   |
|   |   |   |
|
|   |   |
|
|   |
|   |
|
Template Sequence |   |
L | F | D | E | I | E | K | A | H | P | D | V | F | N | I | L | L | Q | I | L | D | D | G | R | L |
Template Known Secondary structure |   |
 |  | S | S | G | G | G | S |
|  |  |  |  |  |  |  |  |  |  |  | T | T | T |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
665 | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|