Return to main results Retrieve Phyre Job Id

Job DescriptionP08322
Confidence11.13%DateThu Jan 5 11:01:05 GMT 2012
Rank19Aligned Residues31
% Identity16%Templatec2jpcA_
PDB info PDB header:dna binding proteinChain: A: PDB Molecule:ssrb; PDBTitle: ssrb dna binding protein
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   78.80.........90.........100........
Predicted Secondary structure 





Query SS confidence 






























Query Sequence  IALRLNVSSETVDASHQALLQYIRPGAQNQM
Query Conservation    
 




 

      

  
 
      
Alig confidence 






























Template Conservation 

  
 

  

      
  

 
  
  
Template Sequence  ISEKLHISIKTVETHRMNMMRKLQVHKVTEL
Template Known Secondary structure  T
S
T
SS
Template Predicted Secondary structure 






Template SS confidence 






























   33......40.........50.........60...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions