Job Description P08322 Confidence 5.87% Date Thu Jan 5 11:01:05 GMT 2012 Rank 42 Aligned Residues 107 % Identity 15% Template c2bhmE_ PDB info PDB header:bacterial protein Chain: E: PDB Molecule:type iv secretion system protein virb8; PDBTitle: crystal structure of virb8 from brucella suis Resolution 2.4 Å

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		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.
Predicted Secondary structure																																																																												.
Query SS confidence																																																																												.
Query Sequence		S	A	D	A	S	Y	L	Q	Q	M	A	L	S	F	I	A	L	R	L	N	V	S	S	E	T	V	D	A	S	H	Q	A	L	L	Q	Y	I	R	P	G	A	Q	N	Q	M	K	V	I	L	A	E	E	A	K	R	I	K	N	D	N	V	N	S	A	F	F	Q	T	S	V	R	V	W	P	.	Q	Y	G	R	V
Query Conservation																																																																												.
Alig confidence																																																																												.
Template Conservation
Template Sequence		S	Y	D	T	V	M	D	K	Y	W	L	S	Q	Y	V	I	A	R	E	T	Y	D	W	Y	T	L	Q	K	D	Y	E	T	V	G	M	L	S	S	P	S	E	G	Q	S	Y	A	S	Q	F	Q	G	D	K	A	L	D	K	Q	Y	G	S	N	V	R	T	S	V	T	I	V	S	I	V	P	N	G	K	G	I	G
Template Known Secondary structure																						B		T	T	T												B										G	G	G	S	S	T	T						T	T	T	S														S	S	S
Template Predicted Secondary structure
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	R	G	V	L	K	T	W	I	G	D	S	K	P	F	T	D	I	K	H	Y	I	L	I	L	K	R	E	N
Query Conservation
Alig confidence																.	.
Template Conservation																.	.
Template Sequence		T	V	R	F	A	K	T	T	K	R	T	D	G	E	.	.	T	T	H	W	I	A	T	I	G	Y	Q	Y	V	N
Template Known Secondary structure																.	.
Template Predicted Secondary structure																.	.
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190			.	.	.	.	.	.	.	.	.	200	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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