Job Description P0AGK1 Confidence 52.35% Date Thu Jan 5 11:29:22 GMT 2012 Rank 5 Aligned Residues 169 % Identity 17% Template d1v4ea_ SCOP info Terpenoid synthases Terpenoid synthases Isoprenyl diphosphate synthases Resolution 2.28

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure
Query SS confidence
Query Sequence		P	T	L	W	A	L	W	V	A	T	P	G	V	P	Q	L	W	I	L	A	V	F	V	A	G	V	W	L	M	R	A	A	G	C	V	V	N	D	Y	A	D	R	K	F	D	G	H	V	K	R	T	A	N	R	P	L	P	S	G	A	V	T	E	K	E	A	R	A	L	F	V	V	L	V	L	I	S	F	L	L
Query Conservation
Alig confidence																																																		.	.	.	.	.
Template Conservation																																																		.	.	.	.	.
Template Sequence		V	R	L	S	I	L	S	F	K	N	R	G	V	E	I	G	E	D	A	I	S	S	L	A	A	L	E	L	V	H	L	A	S	L	L	H	D	D	V	I	D	G	A	R	F	R	R	G	.	.	.	.	.	K	E	T	I	N	F	M	Y	G	D	K	A	A	V	A	A	G	D	L	V	L	V	S	A	F	H	T
Template Known Secondary structure													T																														T		S			T	T	.	.	.	.	.
Template Predicted Secondary structure																																																		.	.	.	.	.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.						.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.													.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	L	T	L	N	T	M	T	I	L	L	S	I	A	A	L	A	L	A	W	V	Y	.	.	.	.	.	.	.	.	.	.	.	.	P	F	M	K	R	Y	T	H	L	P	Q	V	V	L	G	A	A	F	G	W	S	I	P	M	A	F	A	A	V	S	E	S	V	P	L	S	C	W	L	M	F	L	A	N	I	L
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.
Template Conservation																																																																							.	.	.	.
Template Sequence		V	E	E	I	G	N	N	K	L	R	R	A	F	L	N	V	I	G	K	M	S	E	A	E	L	I	E	Q	L	S	R	Y	K	P	I	T	K	E	E	Y	L	R	I	V	E	G	K	S	G	A	L	F	G	L	A	L	Q	L	P	A	L	L	E	G	E	L	G	E	D	.	.	.	.	L	Y	N	L	G	V	T
Template Known Secondary structure																																T	T	S															T																T						.	.	.	.
Template Predicted Secondary structure																																																																							.	.	.	.
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.					.	190	.	.	.	.	.
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.											.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	A	V	A	Y	D	T	Q	Y	A	M	V	D	R	D	.	.	.	.	.	.	.	.	.	.	D	D	V	K	I	G	I	K	S	T	A	I	L	F	G
Query Conservation																	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	G	T	I	Y	Q	M	F	D	D	I	M	D	F	A	G	M	E	K	I	G	K	D	G	F	L	D	L	K	N	G	V	A	S	F	P	L	V	T	A
Template Known Secondary structure																T	T			S			T	T	S	S				T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions