Job Description P0AGK1 Confidence 4.87% Date Thu Jan 5 11:29:22 GMT 2012 Rank 32 Aligned Residues 114 % Identity 17% Template d1qlec_ SCOP info Cytochrome c oxidase subunit III-like Cytochrome c oxidase subunit III-like Cytochrome c oxidase subunit III-like Resolution 3.0

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		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	I	L	W	A	V	A	Y	D	T	Q	Y	A	M	V	D	R	D	D	D	V	K	I	G	I	K	S	T	A	I	L	F	G	Q	Y	D	K	L	I	I	G	I	L	Q	I	G	V	L	A	L	M	A	I	I	G	E	L	N	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	G	L	V	G	V	L	Y	V	M	F	G	W	W	A	D	V	V	N	E	G	E	T	G	E	H	T	P	V	V	R	I	G	L	Q	Y	G	F	I	L	F	I	M	S	E	V	M	F	F	V	A	W	F	W	A	F	I	K	N	A	L	Y	P	M	G	P	D	S	P	I	K	D	G	V	W	P	P	E	G	I
Template Known Secondary structure																								T	T																																						S				T	T	T	T	T	S				S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
									235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.		.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.																							.
Query SS confidence		.	.	.	.	.	.	.																							.
Query Sequence		.	.	.	.	.	.	.	L	G	W	G	Y	Y	W	S	I	L	V	A	G	A	L	F	V	Y	Q	Q	K	L	.	I	A	N	R	E	R	E	A	C	F	K	A	F	M	N	N	N	Y	V	G	L	V	L	F	L	G	L	A	M	S	Y	W	H
Query Conservation		.	.	.	.	.	.	.																							.
Alig confidence		.	.	.	.	.	.	.																							.
Template Conservation
Template Sequence		V	T	F	D	P	W	H	L	P	L	I	N	T	L	I	L	L	L	S	G	V	A	V	T	W	A	H	H	A	F	V	L	E	G	D	R	K	T	T	I	N	G	L	I	V	A	V	I	L	G	V	C	F	T	G	L	Q	A	Y	E	Y	S	H
Template Known Secondary structure						T	T	T																										T										T					T													G	G	G
Template Predicted Secondary structure
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions