Job Description P0AGK1 Confidence 5.15% Date Thu Jan 5 11:29:22 GMT 2012 Rank 29 Aligned Residues 81 % Identity 10% Template c3tc1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:octaprenyl pyrophosphate synthase; PDBTitle: crystal structure of octaprenyl pyrophosphate synthase from2 helicobacter pylori Resolution 2.00 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.		.	.	.	.	.
Predicted Secondary structure																																																																												.
Query SS confidence																																																																												.
Query Sequence		L	L	A	F	H	R	L	M	R	T	D	K	P	I	G	A	L	L	L	L	W	P	T	L	W	A	L	W	V	A	T	P	G	V	P	Q	L	W	I	L	A	V	F	V	A	G	V	W	L	M	R	A	A	G	C	V	V	N	D	Y	A	D	R	K	F	D	G	H	V	K	R	T	A	N	.	R	P	L	P	S
Query Conservation																																																																												.
Alig confidence														.	.	.																																		.	.	.	.	.	.																					.
Template Conservation														.	.	.																																		.	.	.	.	.	.
Template Sequence		K	Q	K	Y	W	R	I	L	E	D	K	T	.	.	.	A	H	F	I	E	A	S	L	K	S	M	A	I	L	L	N	K	D	A	K	I	Y	A	D	F	G	L	N	F	G	M	A	F	.	.	.	.	.	.	Q	I	I	D	D	L	L	D	I	T	Q	D	A	K	T	L	G	K	P	N	F	S	D	F	K	E
Template Known Secondary structure													T	.	.	.															T	T	S																	.	.	.	.	.	.								T	T	S			T	T									T	G	G	G
Template Predicted Secondary structure														.	.	.																																		.	.	.	.	.	.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.				.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.							.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		89	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	V	T	E	K	E	A	R	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	K	T	T	L	P	Y	L	L	L	Y
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions