Job Description P0AGK1 Confidence 13.63% Date Thu Jan 5 11:29:22 GMT 2012 Rank 20 Aligned Residues 80 % Identity 9% Template c3ez3A_ PDB info PDB header:lyase Chain: A: PDB Molecule:farnesyl pyrophosphate synthase, putative; PDBTitle: crystal structure of plasmodium vivax geranylgeranylpyrophosphate2 synthase pvx_092040 with zoledronate and ipp bound Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.					.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																				.	.	.	.
Query SS confidence																				.	.	.	.
Query Sequence		A	F	G	W	S	I	P	M	A	F	A	A	V	S	E	S	V	P	.	.	.	.	L	S	C	W	L	M	F	L	A	N	I	L	W	A	V	A	Y	D	T	Q	Y	A	M	V	D	R	D	D	D	V	K	I	G	I	K	S	T	A	I	L	F	G	Q	Y	D	K	L	I	I	G	I	L	Q	I	G	V	L	A
Query Conservation																				.	.	.	.
Alig confidence																				.	.	.	.																										.
Template Conservation																																																	.
Template Sequence		N	R	G	I	L	V	I	L	I	Y	E	Y	V	K	N	R	I	N	S	S	E	W	E	K	A	A	C	L	A	W	C	I	E	I	L	Q	A	A	F	L	V	A	D	D	I	M	D	.	K	G	E	M	R	R	N	K	Y	C	W	Y	L	L	K	D	V	E	T	K	N	A	V	N	D	V	L	L	L	Y	N	S
Template Known Secondary structure															S																																	T	.	T					T	T				G	G	G	S	T	T	T
Template Predicted Secondary structure																																																	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		225	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	A	I	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	Y	K	L	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions