Return to main results Retrieve Phyre Job Id

Job DescriptionP0AGK1
Confidence2.42%DateThu Jan 5 11:29:22 GMT 2012
Rank59Aligned Residues175
% Identity12%Templatec2o1oB_
PDB info PDB header:structural genomics, unknown functionChain: B: PDB Molecule:putative farnesyl pyrophosphate synthase; PDBTitle: cryptosporidium parvum putative polyprenyl pyrophosphate2 synthase (cgd4_2550) in complex with risedronate.
Resolution2.42 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   28.30.........40.........50.........60.........70.........80.........90.........100.......
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Query Sequence  LLWPTLWALWVATPGVPQLWILAVFVAGVWLMRAAGCVVNDYADRKFDGHVKRTANRPLPSGAVTEKEARALFVVLVLIS
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Template Sequence  GKILVLISSLSSAYSNIKRDSIYLLGWVVEAIQALILIADDIMDSGKFRRG. . . . . APCWYIVHGQSNAINDIFFLKMLS
Template Known Secondary structure  SS
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   76...80.........90.........100.........110.........120...... ...130.........140.........150
 
   108.110.........120.........130.... .....140.........150.........160...
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Query Sequence  FLLVLTLNTMTILLSIAALALAWVYPF. . . . . . . . . . . . . . . . . . . . . . MKRYTHLPQVVLGAAFGWSIPMAFAAVSE. .
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Template Sequence  LSLIFELSSVFGNDIVMKIQKIYNESIFFTVLGQHLDLSYFDLSKADKISERYFSMVEMKTSRYTFYMPVFFGLTLSEIQ
Template Known Secondary structure  TTS


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   151........160.........170.........180.........190.........200.........210.........220.........230
 
   164.....170.........180.........190....... ..200.......
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Query Sequence  SVPLSCWLMFLANILWAVAYDTQYAMVDRDDDVK. . . . . . IGIKSTAILF
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Template Sequence  VSSAQLNLIEAILYKLGEFYQVHNDVSDYLFNDSNADDICRFKLTWPLQK
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   231........240.........250.........260.........270.........280
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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