Return to main results Retrieve Phyre Job Id

Job DescriptionP0AGK1
Confidence2.82%DateThu Jan 5 11:29:22 GMT 2012
Rank48Aligned Residues29
% Identity17%Templatec2hbkA_
PDB info PDB header:hydrolase, gene regulationChain: A: PDB Molecule:exosome complex exonuclease rrp6; PDBTitle: structure of the yeast nuclear exosome component, rrp6p,2 reveals an interplay between the active site and the hrdc3 domain; protein in complex with mn
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   63......70.........80. ........90.
Predicted Secondary structure 







..









Query SS confidence 


















. .









Query Sequence  GCVVNDYADRKFDGHVKRT. . ANRPLPSGAV
Query Conservation      

  
   
    
 ..  


  
 
Alig confidence 


















..









Template Conservation    
      
 


  
 


  


   

Template Sequence  AYLLENFANFKTSKKYQLADWRIRPLSKPMT
Template Known Secondary structure 





TTTTS
TT
SS

Template Predicted Secondary structure 









Template SS confidence 






























   329330.........340.........350.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions