Job Description P0A825 Confidence 99.94% Date Thu Jan 5 11:06:42 GMT 2012 Rank 178 Aligned Residues 343 % Identity 15% Template d3tata_ SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like Resolution 3.50

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		15	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.								.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure									.															.	.	.	.	.	.	.																																																		.	.
Query SS confidence									.															.	.	.	.	.	.	.																																																		.	.
Query Sequence		L	W	Q	A	M	E	Q	.	E	K	V	R	Q	E	E	H	I	E	L	I	A	S	.	.	.	.	.	.	.	E	N	Y	T	S	P	R	V	M	Q	A	Q	G	S	Q	L	T	N	K	Y	A	E	G	Y	P	G	K	R	Y	Y	G	G	C	E	Y	V	D	I	V	E	Q	L	A	I	D	R	A	K	E	.	.
Query Conservation									.															.	.	.	.	.	.	.																																																		.	.
Alig confidence									.															.	.	.	.	.	.	.																			.	.	.	.	.																											.	.
Template Conservation																																																	.	.	.	.	.
Template Sequence		I	L	T	L	M	E	R	F	K	E	D	P	R	S	D	K	V	N	L	S	I	G	L	Y	Y	N	E	D	G	I	I	P	Q	L	Q	A	V	A	E	A	E	A	R	L	N	A	Q	.	.	.	.	.	P	H	G	A	S	L	Y	L	P	M	E	G	L	N	C	Y	R	H	A	I	A	P	L	L	F	G	A	D
Template Known Secondary structure		T	T	T								S			S	S					S			S				T	T	S	S															T	T	S	.	.	.	.	.			S	S						T	T														T		S	S
Template Predicted Secondary structure																																																	.	.	.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.						.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
				85	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.			110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.															.												.	.
Query SS confidence		.	.															.												.	.
Query Sequence		.	.	L	F	G	A	D	Y	A	N	V	Q	P	H	S	G	.	S	Q	A	N	F	A	V	Y	T	A	L	.	.	L	E	P	G	D	T	V	L	G	M	N	L	A	H	G	G	H	L	T	H	G	S	P	V	N	F	S	G	K	L	Y	N	I	V	P	Y	G	I	D	A	T	G	H	I	D	Y	A	D	L	E
Query Conservation		.	.															.												.	.
Alig confidence		.	.															.												.	.																				.	.	.
Template Conservation																																																			.	.	.
Template Sequence		H	P	V	L	K	Q	Q	R	V	A	T	I	Q	T	L	G	G	S	G	A	L	K	V	G	A	D	F	L	K	R	Y	F	P	E	S	G	V	W	V	S	D	P	T	W	E	N	H	V	A	.	.	.	I	F	A	G	A	G	F	E	V	S	T	Y	P	W	Y	D	E	A	T	N	G	V	R	F	N	D	L	L
Template Known Secondary structure							T	T							B	S																		S	S							S	S			T	T				.	.	.				T	T	T											T	T	T	S	S
Template Predicted Secondary structure																																																			.	.	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140				.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		160	.	.	.	.			.	.	.	.	.	170	.	.	.			.	.	.	.	.	.	180	.	.				.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.							.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure							.	.										.	.										.	.	.																																		.	.	.	.	.	.
Query SS confidence							.	.										.	.										.	.	.																																		.	.	.	.	.	.
Query Sequence		K	Q	A	K	E	.	.	H	K	P	K	M	I	I	G	G	.	.	F	S	A	Y	S	G	V	V	D	.	.	.	W	A	K	M	R	E	I	A	D	S	I	G	A	Y	L	F	V	D	M	A	H	V	A	G	L	V	A	A	G	V	Y	P	N	.	.	.	.	.	.	P	V	P	H	A	H	V	V	T	T	T
Query Conservation							.	.										.	.										.	.	.																																		.	.	.	.	.	.
Alig confidence							.	.										.	.										.	.	.																																		.	.	.	.	.	.
Template Conservation
Template Sequence		A	T	L	K	T	L	P	A	R	S	I	V	L	L	H	P	C	C	H	N	P	T	G	A	D	L	T	N	D	Q	W	D	A	V	I	E	I	L	K	A	R	E	L	I	P	F	L	D	I	A	Y	Q	G	F	G	A	G	M	E	E	D	A	Y	A	I	R	A	I	A	S	A	G	L	P	A	L	V	S	N	S
Template Known Secondary structure					T	T			S	S							S	S	S		S	S	S																			T	T							B	S		T	T	S	S	S														T	T	T							B
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		227	.	.	230			.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280									.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure						.	.																																																			.	.	.	.	.	.	.	.
Query SS confidence						.	.																																																			.	.	.	.	.	.	.	.
Query Sequence		T	H	K	T	.	.	L	A	G	P	R	G	G	L	I	L	A	K	G	G	S	E	E	L	Y	K	K	L	N	S	A	V	F	P	G	G	Q	G	G	P	L	M	H	V	I	A	G	K	A	V	A	L	K	E	A	M	.	.	.	.	.	.	.	.	E	P	E	F	K	T	Y	Q	Q	Q	V	A	K	N	A	K
Query Conservation						.	.																																																			.	.	.	.	.	.	.	.
Alig confidence						.	.																																																			.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	S	K	I	F	S	L	Y	G	E	R	V	G	G	L	S	V	M	C	E	D	A	E	A	A	G	R	V	L	G	Q	L	K	A	T	V	R	R	N	Y	S	S	P	P	N	F	G	A	Q	V	V	A	A	V	L	N	D	E	A	L	K	A	S	W	L	A	E	V	E	E	M	R	T	R	I	L	A	M	R	Q
Template Known Secondary structure							T		T	T	T			B							S	S	T	T													T	T	T	T	T	S	S			S												S
Template Predicted Secondary structure
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
		297	.	.	300	.	.	.	.	.	.					.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
Predicted Secondary structure												.	.	.	.
Query SS confidence												.	.	.	.
Query Sequence		A	M	V	E	V	F	L	E	R	G	.	.	.	.	Y	K	V	V	S	G	G	T	D	N	H	L	F	L	V	D	L	V	D	K	N	L	T	G	K	E	A	D	A	A	L	G	R	A	N	I	T	V	N	K	N	S	V	P	N	D	P	K	S	P	F	V	T	S	G	I	R	V	G	T	P	A	I	T	R	R
Query Conservation												.	.	.	.
Alig confidence												.	.	.	.															.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.
Template Conservation																														.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.
Template Sequence		E	L	V	K	V	L	S	T	E	M	P	E	R	N	F	D	Y	L	L	N	Q	R	G	M	F	S	Y	T	.	.	.	.	.	.	G	L	S	A	A	Q	V	D	R	L	R	E	E	F	G	V	Y	L	I	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	M	C	V	A	.	.	.	.	.
Template Known Secondary structure						T	T	T	T	T		T	T	S		T	T							S	S	B				.	.	.	.	.	.											T	T	T	T						S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S			B	T	T	.	.	.	.	.
Template Predicted Secondary structure																														.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.
Template SS confidence
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.							.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.															.	.	.	.	.	390
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	K	E	A	E	A	K	E	L	A	G	W	M	C	D	V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	L	N	T	A	N	V	Q	R	V	A	K	A	F	A	A	V	M
Template Known Secondary structure		S			T	T	T
Template Predicted Secondary structure
Template SS confidence
		391	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions