Job Description P0A825 Confidence 99.91% Date Thu Jan 5 11:06:42 GMT 2012 Rank 212 Aligned Residues 332 % Identity 16% Template d2gsaa_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.40

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.						40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																.	.	.	.	.
Query SS confidence																.	.	.	.	.
Query Sequence		Q	E	E	H	I	E	L	I	A	S	E	N	Y	T	.	.	.	.	.	S	P	R	V	M	Q	A	Q	G	S	Q	L	T	N	K	Y	A	E	G	Y	P	G	K	R	Y	Y	G	G	C	E	Y	V	D	I	V	E	Q	L	A	I	D	R	A	K	E	L	F	G	A	D	Y	A	N	V	Q	P	H	S	G	S	Q
Query Conservation																.	.	.	.	.
Alig confidence																.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	N	R	Y	I	D	Y	V	G	T	W	G	P	A	I	C	G	H	A	H	P	E	V	I	E	A	L	K	V	A	M	E	K	G	T	S	F	G	A	P	C	.	.	.	.	.	.	.	.	.	.	.	A	L	E	N	V	L	A	E	M	V	N	D	A	V	P	S	I	E	M	V	R	F	V	N	S	G	T	E
Template Known Secondary structure		S						S	S	G	G	G	T	T	T	T	T		B	T													T	T		S			S	S			.	.	.	.	.	.	.	.	.	.	.														S	T	T		S						S	S
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.												.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
		101	.	.	.	.	.	.	.	.	110			.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130																		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure												.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	N	F	A	V	Y	T	A	L	L	.	.	E	P	G	D	T	V	L	G	M	N	L	A	H	G	G	H	L	T	H	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	P	V	N	F	S	G	K	L	Y	N	I	V	P	Y	G	I	D	A	T	G	H	I	D	Y	A	D	L	E	K	Q
Query Conservation												.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.	.
Template Sequence		A	C	M	A	V	L	R	L	M	R	A	Y	T	G	R	D	K	I	I	K	F	E	G	C	Y	H	G	H	A	D	M	F	L	V	K	A	G	S	G	V	A	T	L	G	L	P	S	S	P	G	V	P	K	K	T	T	A	N	T	L	T	T	P	Y	N	.	.	.	.	.	.	.	D	L	E	A	V	K	A	L
Template Known Secondary structure																							T	T					S		G	G	G		S	S								T	T			S		S	S	S						T	T						T	T	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																			.	.	.	.	.	.	.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190								.	.	.	.	.	.	.	.
		162	.	.	.	.				.	.	.	170	.	.	.		.	.	.	.	.	.	180	.	.					.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.		.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure							.	.	.								.										.	.	.	.																																					.
Query SS confidence							.	.	.								.										.	.	.	.																																					.
Query Sequence		A	K	E	H	K	.	.	.	P	K	M	I	I	G	G	.	F	S	A	Y	S	G	V	V	D	.	.	.	.	W	A	K	M	R	E	I	A	D	S	I	G	A	Y	L	F	V	D	M	A	H	V	A	G	L	V	A	A	G	V	Y	P	N	P	V	P	.	H	A	H	V	V	T	T	T	T	H	K	T	L	A
Query Conservation							.	.	.								.										.	.	.	.																																					.
Alig confidence							.	.	.								.										.	.	.	.																																					.													.
Template Conservation																																																																																.
Template Sequence		F	A	E	N	P	G	E	I	A	G	V	I	L	E	P	I	V	G	N	S	G	F	I	V	P	D	A	G	F	L	E	G	L	R	E	I	T	L	E	H	D	A	L	L	V	F	D	E	V	M	T	G	F	R	I	A	Y	G	G	V	Q	E	K	F	G	V	T	P	D	L	T	T	L	G	K	I	I	G	.	G
Template Known Secondary structure			T	T	S	T	T	T								S	S	B		S	S	S		B				T	T												T	T								T	T	T	B	T	T	T	B	T	T						T	T				S						G	G	G	G	.	T
Template Predicted Secondary structure																																																																																.
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.		.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	P	R	G	G	L	I	L	A	K	G	G	S	E	E	L	Y	K	K	L	N	S	A	V	F	P	G	G	Q	G	G	P	L	M	H	V	I	A	G	K	A	V	A	L	K	E	A	M	E	P	E	F	K	T	Y	Q	Q	Q	V	A	K	N	A	K	A	M	V	E	V	F	L	E	R	G	Y	K	V	V	S	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	L	P	V	G	A	Y	G	G	K	R	E	I	M	Q	L	V	A	P	A	G	P	M	Y	Q	A	G	T	L	S	G	N	P	L	A	M	T	A	G	I	K	T	L	E	L	L	R	Q	P	G	T	Y	E	Y	L	D	Q	I	T	K	R	L	S	D	G	L	L	A	I	A	Q	E	T	G	H	A	A	C	G	G
Template Known Secondary structure		T	S													T	T	B	T	T	T	S	S	B					T	T	T	T																T	S	T	T																							T	T
Template Predicted Secondary structure
Template SS confidence
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.													330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	T	D	N	H	L	F	L	V	D	L	V	D	K	N	L	T	.	.	.	.	.	.	.	.	.	.	.	.	G	K	E	A	D	A	A	L	G	R	A	N	I	T	V	N	K	N	S	V	P	N	D	P	K	S	P	F	V	T	S	G	I	R	V	G	T	P	A	I	T	R	R	G	F	K	E	A	E	A	K
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.															.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Template Conservation				.																																													.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Template Sequence		Q	V	.	S	G	M	F	G	F	F	F	T	E	G	P	V	H	N	Y	E	D	A	K	K	S	D	L	Q	K	F	S	R	F	H	R	G	M	L	E	Q	G	I	Y	L	A	P	S	.	.	.	.	.	.	.	.	.	.	.	.	Q	F	E	A	G	F	T	S	L	A	H	T	.	.	.	.	E	E	D	I	D
Template Known Secondary structure				.	T	T						S	S	S					S					T	T	S															T	T					S	S	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S						T	T			.	.	.	.
Template Predicted Secondary structure				.																																													.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Template SS confidence
		358	.		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.													.	.	.	.	.	.	410	.	.	.	.	.					.	.	.	.	420
		381	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	A	G	W	M	C	D	V	L	D	S	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	T	L	A	A	A	R	T	V	M	S	A	L
Template Known Secondary structure												T
Template Predicted Secondary structure
Template SS confidence
		421	.	.	.	.	.	.	.	.	430	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions