Return to main results Retrieve Phyre Job Id

Job DescriptionP0A825
Confidence99.96%DateThu Jan 5 11:06:42 GMT 2012
Rank132Aligned Residues356
% Identity16%Templated2gb3a1
SCOP infoPLP-dependent transferase-like PLP-dependent transferases AAT-like
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   14.....20.........30....... ..40.........50.........60.........70.........80....... ..
Predicted Secondary structure 








..
















..

Query SS confidence 























. .

















































. .

Query Sequence  ELWQAMEQEKVRQEEHIELIASEN. . YTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFG. . AD
Query Conservation 
          
    
 
    
..  

 
  
        
           
               
 
 
..  
Alig confidence 























..













........



























..

Template Conservation              
  

 
  
 
          
     ........     
    
   

 


  
    
    
Template Sequence  KLVPFAEXAKKRGVRIHHLNIGQPDLKTPEVFFERIYENK. . . . . . . . PEVVYYSHSAGIWELREAFASYYKRRQRVDVK
Template Known Secondary structure  GGTT

SS



S


TT
........
SS




TT

TS




Template Predicted Secondary structure 














........














Template SS confidence 















































































   18.20.........30.........40.........50....... ..60.........70.........80.........
 
   90........ .100.........110.........120.........130.........140.........150.........160........
Predicted Secondary structure 


.


































Query SS confidence 








.





































































Query Sequence  YANVQPHSG. SQANFAVYTALLEPGDTVLGMNLAHGGHLTHGSPVNFSGKLYNIVPYGIDATGHIDYADLEKQAKEHKPK
Query Conservation     
   

.
 
    
 

  


 
           
        
                
 
 
          
Alig confidence 








.

























...




















.


















Template Conservation     
  
 
   

      
   

 


  
 
 ...         
           .                   
Template Sequence  PENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYA. . . NYNAFAKIAGVKLIPVTRRXE. EGFAIPQNLESFINERTKG
Template Known Secondary structure  GGGS

TT
S

T...T


GG.GTS


TTGGGG

TT
Template Predicted Secondary structure 










...



.











Template SS confidence 















































































   90.........100.........110.........120..... ....130.........140...... ...150.........160.....
 
   169170.... .....180.. .......190.........200.........210.........220. ........230. ........240.
Predicted Secondary structure 

.







...




















..





.





Query SS confidence 





.







. . .






































. .









.









Query Sequence  MIIGGF. SAYSGVVD. . . WAKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPVPHAH. . VVTTTTHKTL. AGPRGGLILA
Query Conservation 

    .
  
   
...
  
  

   
  



 
   
              
..    
  
 
. 
  

 
  
Alig confidence 





.







...






































..









.









Template Conservation       
 



          
          

 
                       
   
 

    
   
    
Template Sequence  IVLSNPCNPTGVVYGKDEXRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSIESDKVVVIDSVSKFSACGARVGCLIT
Template Known Secondary structure  SS
TTT




TT

TTTT
B
SS



GGGS

TT



S
GGG


Template Predicted Secondary structure 















































Template SS confidence 















































































   166...170.........180.........190.........200.........210.........220.........230.........240.....
 
   242.......250.........260.........270.........280.........290.........300.........310.........320.
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  KGGSEELYKKLNSAVFPGGQGGPLMHVIAGKAVALKEAMEPEFKTYQQQVAKNAKAMVEVFLERGYKVVSGGTDNHLFLV
Query Conservation                              

                          
   
   
  
            
Alig confidence 




















.....





















































Template Conservation                       .....                                  
          
  
     
Template Sequence  RNEELISHAXKLAQGRLAPPL. . . . . LEQIGSVGLLNLDDSFFDFVRETYRERVETVLKKLEEHGLKRFTKPSGAFYITA
Template Known Secondary structure  S
S



.....T

TT


B


SBSS
Template Predicted Secondary structure 








.....











Template SS confidence 















































































   247..250.........260....... ..270.........280.........290.........300.........310.........320.
 
   322.......330....... ..340.........350.........360.........370.........380.........390....
Predicted Secondary structure 





.....

























Query SS confidence 















. . . . .
























































Query Sequence  DLVDKNLTGKEADAAL. . . . . GRANITVNKNSVPNDPKSPFVTSGIRVGTPAITRRGFKEAEAKELAGWMCDVLDSIN
Query Conservation                 
.....   

 
     
           


     
  
    

   
  
   
    
Alig confidence 

.












.....

















.









......





















Template Conservation   
.                     

    
  
     .     



 ......    
 
  

 

  

  
 
Template Sequence  EL. PVEDAEEFARWXLTDFNXDGETTXVAPLRGFYLTPG. LGKKEIRIAC. . . . . . VLEKDLLSRAIDVLXEGLKXFC
Template Known Secondary structure 
.SSS
S

BTT
GGGG
SSTT.TTSS
......
S
Template Predicted Secondary structure 
.















.



......



Template SS confidence 













































































   322. ......330.........340.........350......... 360......... 370.........380.........390.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions