Job Description P0A825 Confidence 99.89% Date Thu Jan 5 11:06:42 GMT 2012 Rank 217 Aligned Residues 347 % Identity 15% Template d1zoda1 SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.80

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		26	.	.	.	30	.	.	.	.	.			.	.	.	.				40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.			.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.					.	.	.																																																.	.
Query SS confidence												.	.					.	.	.																																																.	.
Query Sequence		Q	E	E	H	I	E	L	I	A	S	.	.	E	N	Y	T	.	.	.	S	P	R	V	M	Q	A	Q	G	S	Q	L	T	N	K	Y	A	E	G	Y	P	G	K	R	Y	Y	G	G	C	E	Y	V	D	I	V	E	Q	L	A	I	D	R	A	K	E	L	F	.	.	G	A	D	Y	A	N	V	Q	P	H	S	G
Query Conservation												.	.					.	.	.																																																.	.
Alig confidence												.	.					.	.	.													.	.	.	.	.	.	.	.	.																											.	.						.
Template Conservation																																	.	.	.	.	.	.	.	.	.																																		.
Template Sequence		G	R	A	I	L	D	F	T	S	G	Q	M	S	A	V	L	G	H	C	H	P	E	I	V	S	V	I	G	E	Y	A	.	.	.	.	.	.	.	.	.	G	K	L	D	H	L	F	S	E	M	L	S	R	P	V	V	D	L	A	T	R	L	A	N	I	T	P	P	G	L	D	R	A	.	L	L	L	S	T	G
Template Known Secondary structure								T	T					T		T	T		B	T													.	.	.	.	.	.	.	.	.								T	T																	S		T	T					.				S
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.																																		.
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.										.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.		.	.	.	.	110	.
		99	100	.	.	.	.	.	.	.	.	.			110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.										140	.	.	.	.	.	.	.	.	.	150	.	.											.	.	.	.	.
Predicted Secondary structure													.	.																															.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.																															.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.
Query Sequence		S	Q	A	N	F	A	V	Y	T	A	L	.	.	L	E	P	G	D	T	V	L	G	M	N	L	A	H	G	G	H	L	T	H	G	S	P	V	N	F	S	G	K	L	.	.	.	.	.	.	.	.	.	Y	N	I	V	P	Y	G	I	D	A	T	G	H	.	.	.	.	.	.	.	.	.	.	I	D	Y	A	D
Query Conservation													.	.																															.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.																															.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	E	S	N	E	A	A	I	R	M	A	K	L	V	T	G	K	Y	E	I	V	G	F	A	Q	S	W	H	G	M	T	G	A	A	A	S	A	T	Y	S	A	G	R	K	G	V	G	P	A	A	V	G	S	F	A	I	P	A	P	F	T	Y	R	P	R	F	E	R	N	G	A	Y	D	Y	L	A	E	L	D	Y
Template Known Secondary structure																	T								T	T					S	S						T			S	S			S	S	S					T	T									T	T	S						T	T
Template Predicted Secondary structure
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		158	.	160	.	.	.	.				.	.	.	.	.	170	.	.	.	.			.	.	.	.	.	180	.	.					.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.											.	.									.	.	.	.
Query SS confidence									.	.	.											.	.									.	.	.	.
Query Sequence		L	E	K	Q	A	K	E	.	.	.	H	K	P	K	M	I	I	G	G	F	.	.	S	A	Y	S	G	V	V	D	.	.	.	.	W	A	K	M	R	E	I	A	D	S	I	G	A	Y	L	F	V	D	M	A	H	V	A	G	L	V	A	A	G	V	Y	P	N	P	V	P	H	A	H	V	V	T	T	T	T	H
Query Conservation									.	.	.											.	.									.	.	.	.
Alig confidence									.	.	.											.	.									.	.	.	.
Template Conservation
Template Sequence		A	F	D	L	I	D	R	Q	S	S	G	N	L	A	A	F	I	A	E	P	I	L	S	S	G	G	I	I	E	L	P	D	G	Y	M	A	A	L	K	R	K	C	E	A	R	G	M	L	L	I	L	D	E	A	Q	T	G	V	G	R	T	G	T	M	F	A	C	Q	R	D	G	V	T	P	D	I	L	T	L	S
Template Known Secondary structure												S									S			T	T	T	T						T	T													T								T	T	T	T	T	T	T	T	S	S	S	S	T					T				S
Template Predicted Secondary structure
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
		229	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		K	T	L	.	A	G	P	R	G	G	L	I	L	A	K	G	G	S	E	E	L	Y	K	K	L	N	S	A	V	F	P	G	G	Q	G	G	P	L	M	H	V	I	A	G	K	A	V	A	L	K	E	A	M	E	P	E	F	K	T	Y	Q	Q	Q	V	A	K	N	A	K	A	M	V	E	V	F	L	E	R	G	Y
Query Conservation					.
Alig confidence					.																				.	.
Template Conservation																									.	.
Template Sequence		K	T	L	G	A	G	L	P	L	A	A	I	V	T	S	A	A	I	E	E	R	A	H	.	.	E	L	G	Y	L	F	Y	T	T	H	V	S	D	P	L	P	A	A	V	G	L	R	V	L	D	V	V	Q	R	D	G	L	V	A	R	A	N	V	M	G	D	R	L	R	R	G	L	L	D	L	M	E	R	F	D
Template Known Secondary structure						T	T	S	S																.	.		T	T						T	T	T	T																		T	T																								T
Template Predicted Secondary structure																									.	.
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.			.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.								.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
Predicted Secondary structure																				.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.
Query Sequence		K	V	V	S	G	G	T	D	N	H	L	F	L	V	D	L	V	D	.	.	.	.	.	.	.	K	N	L	T	G	K	E	A	D	A	A	L	G	R	A	N	I	T	V	N	K	N	S	V	P	N	D	P	K	S	P	F	V	T	S	G	I	R	V	G	T	P	A	I	T	R	R	G	F	K	E	A	E	A	K
Query Conservation																				.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.																															.	.	.	.	.	.											.	.	.	.
Template Conservation																																																									.	.	.	.	.	.											.	.	.	.
Template Sequence		C	I	G	D	V	R	G	R	G	L	L	L	G	V	E	I	V	K	D	R	R	T	K	E	P	A	D	G	L	G	A	K	I	T	R	E	C	M	N	L	G	L	S	M	N	I	V	Q	L	P	G	M	G	G	V	.	.	.	.	.	.	F	R	I	A	P	P	L	T	V	S	.	.	.	.	E	D	E	I	D
Template Known Secondary structure		T								T	T										T	T	T	T				T	T												T	T									T	T	S				.	.	.	.	.	.							T	T			.	.	.	.
Template Predicted Secondary structure																																																									.	.	.	.	.	.											.	.	.	.
Template SS confidence
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.							.	.	.	.	.	410	.	.	.	.					.	.	.	.	.
		381	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	A	G	W	M	C	D	V	L	D	S	I	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G	L	S	L	L	G	Q	A	I	E	R	A	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		420	.	.	.	.	.	.	.	.	.	430	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions