Job Description P0A825 Confidence 100.00% Date Thu Jan 5 11:06:42 GMT 2012 Rank 15 Aligned Residues 369 % Identity 16% Template d1wyub1 SCOP info PLP-dependent transferase-like PLP-dependent transferases Glycine dehydrogenase subunits (GDC-P) Resolution 2.10

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	M	N	I	A	D	Y	D	A	E	L	W	Q	A	M	E	Q	E	K	V	R	Q	E	E	H	I	E	L	I	A	S	E	N	Y	T	S	P	R	V	M	Q	A	Q	G	S	Q	L	T	N	K	Y	A	E	G	Y	P	G	K	R	Y	Y	G	G	C	E	Y	V	D	I	V	E	Q	L	A	I	D	R	A	K	E
Query Conservation
Alig confidence																																															.																								.	.	.	.
Template Conservation																																															.																								.	.	.	.
Template Sequence		E	V	D	E	L	T	L	V	R	H	Y	T	G	L	S	R	R	Q	V	G	V	D	T	T	F	Y	P	L	G	S	C	T	M	K	Y	N	P	K	L	H	E	E	A	A	R	.	L	F	A	D	L	H	P	Y	Q	D	P	R	T	A	Q	G	A	L	R	L	M	W	E	.	.	.	.	L	G	E	Y	L	K	A
Template Known Secondary structure																	T	T				T	T	T	S				B	T	T	T															.	T	T	S	S			T	T	S		G	G	G											.	.	.	.
Template Predicted Secondary structure																																															.																								.	.	.	.
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.					.	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110										.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.
Query Sequence		L	F	G	A	D	Y	A	N	V	Q	P	H	S	G	S	Q	A	N	F	A	V	Y	T	A	L	L	.	.	.	.	.	.	.	.	.	E	P	G	D	T	V	L	G	M	N	L	A	H	G	G	H	L	T	H	G	S	P	V	N	F	S	G	K	L	Y	N	I	V	P	Y	G	I	D	A	T	G	H	I	D	Y
Query Conservation																												.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.															.	.	.																		.	.
Template Conservation																																																			.	.	.																		.	.
Template Sequence		L	T	G	M	D	A	I	T	L	E	P	A	A	G	A	H	G	E	L	T	G	I	L	I	I	R	A	Y	H	E	D	R	G	E	G	R	T	R	R	V	V	L	V	P	D	S	A	H	G	.	.	.	S	N	P	A	T	A	S	M	A	G	Y	Q	V	R	E	I	P	.	.	S	G	P	E	G	E	V	D	L
Template Known Secondary structure				T		S							S	S																			T	T		T	T	T								T	T	S		T	.	.	.									T	T								.	.	B		T	T	S	S	B
Template Predicted Secondary structure																																																			.	.	.																		.	.
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.				.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.			.	.	.	.	.	190	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																												.																																																				.	.
Query SS confidence																												.																																																				.	.
Query Sequence		A	D	L	E	K	Q	A	K	E	H	K	P	K	M	I	I	G	G	F	S	A	Y	S	G	V	V	.	D	W	A	K	M	R	E	I	A	D	S	I	G	A	Y	L	F	V	D	M	A	H	V	A	G	L	V	A	A	G	V	Y	P	N	P	V	P	H	A	H	V	V	T	T	T	T	H	K	T	L	A	.	.
Query Conservation																												.																																																				.	.
Alig confidence																												.																																			.	.																.	.
Template Conservation																																																															.	.
Template Sequence		E	A	L	K	R	E	L	G	P	H	V	A	A	L	M	L	T	N	P	N	T	L	G	L	F	E	R	R	I	L	E	I	S	R	L	C	K	E	A	G	V	Q	L	Y	Y	D	G	A	N	L	N	A	I	M	G	W	A	R	P	G	D	.	.	M	G	F	D	V	V	H	L	N	L	H	K	T	F	T	V	P
Template Known Secondary structure									S	T	T								S	S		T	T	S				T	T												T							G	G	G	G	G	G	T	T	T	T						.	.		T		S						T	T	T	T	T
Template Predicted Secondary structure																																																															.	.
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.			.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
						233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.																.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure		.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	G	P	R	G	G	L	I	L	A	K	G	G	S	E	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	K	K	L	N	S	A	V	F	P	G	G	Q	G	G	P	L	M	H	V	I	A	G	K	A	V	A	L	K	E	A	M	E	P	E	F	K	T	Y	Q	Q	Q	V	A	K
Query Conservation		.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	G	G	G	G	P	G	S	G	P	V	G	V	K	A	H	L	A	P	Y	L	P	V	P	L	V	E	R	G	E	E	G	F	Y	L	D	F	D	R	P	K	S	I	G	R	V	R	S	F	Y	G	N	F	L	A	L	V	R	A	W	A	Y	I	R	T	L	G	L	E	G	L	K	K	A	A	A	L	A	V	L
Template Known Secondary structure			T	T	S											G	G	G	G	G	G			S							S	S									T	T					S	S	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	K	A	M	V	E	V	F	L	E	R	G	Y	K	V	V	S	G	G	T	D	N	H	L	F	L	V	D	L	V	D	K	N	L	T	G	K	E	A	D	A	A	L	G	R	A	N	I	T	V	N	K	N	S	V	P	N	D	P	K	S	P	F	V	T	S	G	I	R	V	G	T	P	A	I	T	R	R	G
Query Conservation
Alig confidence																																.																																	.	.	.	.	.											.	.
Template Conservation																																.																																	.	.	.	.	.											.	.
Template Sequence		N	A	R	Y	L	K	E	L	L	K	E	K	G	Y	R	V	P	Y	D	G	P	S	M	H	E	F	V	A	Q	P	.	P	E	G	F	R	A	L	D	L	A	K	G	L	L	E	L	G	F	H	P	P	T	V	Y	F	P	L	I	V	K	E	A	.	.	.	.	.	L	M	V	E	P	T	E	T	E	A	.	.
Template Known Secondary structure													T	T		B		S	S		S	S			S					B		.	S	T	T													T	T							S		S	T	T	S	T	T		.	.	.	.	.							T	T	S		.	.
Template Predicted Secondary structure																																.																																	.	.	.	.	.											.	.
Template SS confidence
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.		.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.						.	.	.	.	.	.	420	.	.	.
		374	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	K	E	A	E	A	K	E	L	A	G	W	M	C	D	V	L	D	S	I	N	D
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	K	E	T	L	E	A	F	A	E	A	M	G	A	L	L	K	K	P	K	E
Template Known Secondary structure		.	.																T	S
Template Predicted Secondary structure		.	.
Template SS confidence
				424	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions