Job Description P0A825 Confidence 99.97% Date Thu Jan 5 11:06:42 GMT 2012 Rank 90 Aligned Residues 349 % Identity 15% Template d1qz9a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 1.85

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		W	Q	A	M	E	Q	E	K	V	R	Q	E	E	H	I	E	L	I	A	S	E	.	N	Y	T	S	P	R	V	M	Q	A	Q	G	S	Q	L	T	N	K	Y	A	E	G	Y	P	G	K	R	Y	Y	G	G	C	E	Y	V	D	I	V	E	Q	L	A	I	D	R	A	K	E	L	F	G	A	D	Y	A	N	V	Q
Query Conservation																							.
Alig confidence																							.																																		.	.	.
Template Conservation																																																									.	.	.
Template Sequence		L	A	P	L	R	Q	Q	F	A	L	P	E	G	V	I	Y	L	D	G	N	S	L	G	A	R	P	V	A	A	L	A	R	A	Q	A	V	I	A	E	E	W	G	N	G	L	I	R	S	W	N	S	A	G	W	R	.	.	.	D	L	S	E	R	L	G	N	R	L	A	T	L	I	G	A	R	D	G	E	V	V
Template Known Secondary structure		T	G	G	G	G	G	G	B				T	T						T	T	T	S				B	T	T											T						G	G	G					T	S	G	G	.	.	.	G											T	T	T	T			T	T	S
Template Predicted Secondary structure																																																									.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70				.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		95	.	.	.		.	100	.	.	.	.	.	.	.	.	.								110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure						.												.	.	.	.	.	.	.																							.
Query SS confidence						.												.	.	.	.	.	.	.																							.
Query Sequence		P	H	S	G	.	S	Q	A	N	F	A	V	Y	T	A	L	.	.	.	.	.	.	.	L	E	P	G	D	T	V	L	G	M	N	L	A	H	G	G	H	L	T	H	G	S	.	P	V	N	F	S	G	K	L	Y	N	I	V	P	Y	G	I	D	A	T	G	H	I	D	Y	A	D	L	E	K	Q	A	K	E	H
Query Conservation						.												.	.	.	.	.	.	.																							.
Alig confidence						.												.	.	.	.	.	.	.																							.																.	.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.	.
Template Sequence		V	T	D	T	T	S	I	N	L	F	K	V	L	S	A	A	L	R	V	Q	A	T	R	S	P	E	R	R	V	I	V	T	E	T	S	N	F	P	T	D	L	Y	I	A	E	G	L	A	D	M	L	Q	Q	G	Y	T	L	R	L	V	D	.	.	.	.	.	.	.	S	P	E	E	L	P	Q	A	I	D	Q	D
Template Known Secondary structure				S																					S	T	T								T	T	S																	S	S							S	.	.	.	.	.	.	.	S	G	G	G						S	T	T
Template Predicted Secondary structure																																																															.	.	.	.	.	.	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.								.	.	.	.	.	.	160	.	.	.	.	.
		166	.	.	.	170	.	.	.	.		.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.			.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure											.																																																										.	.
Query SS confidence											.																																																										.	.
Query Sequence		K	P	K	M	I	I	G	G	F	.	S	A	Y	S	G	V	V	D	W	A	K	M	R	E	I	A	D	S	I	G	A	Y	L	F	V	D	M	A	H	V	A	G	L	V	A	A	G	V	Y	P	N	P	V	P	H	A	H	V	V	T	T	T	T	H	K	T	L	.	.	A	G	P	R	G	G	L	I	L	A	K
Query Conservation											.																																																										.	.
Alig confidence											.																																							.	.	.																	.	.
Template Conservation																																																		.	.	.
Template Sequence		T	A	V	V	M	L	T	H	V	N	Y	K	T	G	Y	M	H	D	M	Q	A	L	T	A	L	S	H	E	C	G	A	L	A	I	W	D	L	A	H	S	A	G	A	V	P	V	D	L	.	.	.	H	Q	A	G	A	D	Y	A	I	G	C	T	Y	K	Y	L	N	G	G	P	G	S	Q	A	F	V	W	V	S
Template Known Secondary structure									S	B		T	T	T		B	B														T								T	T	T	T	T	T	S					.	.	.				T		S						S	S	S	T	T				T	T
Template Predicted Secondary structure																																																		.	.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.				.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.																				.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	G	S	E	E	L	Y	K	K	L	N	S	A	V	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	G	G	Q	G	G	P	L	M	H	V	I	A	G	K	A	V	A	L	K	E	A	M	E	P	E	F	K	T	Y	Q	Q	Q	V	A	K	N	A	K	A	M	V	E	V	F	L
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	Q	L	C	D	L	V	P	Q	P	L	S	G	W	F	G	H	S	R	Q	F	A	M	E	P	R	Y	E	P	S	N	G	I	A	R	Y	L	C	G	T	Q	P	I	T	S	L	A	M	V	E	C	G	L	D	V	F	A	Q	T	D	M	A	S	L	R	R	K	S	L	A	L	T	D	L	F	I	E	L	V	E
Template Known Secondary structure		T	T	T	T	T	T	S			S				G	G	G	B		T	T	S				S	S			B		S	S	G	G	G	G			S																		T	T	S
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
		304	.					.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.		.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.																																																														.
Query SS confidence				.	.	.	.																																																														.
Query Sequence		E	R	.	.	.	.	G	Y	K	V	V	S	G	G	T	D	N	H	L	F	L	V	D	L	V	D	K	N	L	T	G	K	E	A	D	A	A	L	G	R	A	N	I	T	V	N	K	N	S	V	P	N	D	P	K	S	P	F	V	T	S	G	I	R	V	G	T	.	P	A	I	T	R	R	G	F	K	E	A	E
Query Conservation				.	.	.	.																																																														.
Alig confidence				.	.	.	.									.																																			.	.	.	.	.	.	.	.	.	.									.						.	.	.	.
Template Conservation																.																																			.	.	.	.	.	.	.	.	.	.															.	.	.	.
Template Sequence		Q	R	C	A	A	H	E	L	T	L	V	T	P	R	.	E	H	A	K	R	G	S	H	V	S	F	E	H	P	E	G	Y	A	V	I	Q	A	L	I	D	R	G	V	I	G	D	Y	R	E	.	.	.	.	.	.	.	.	.	.	P	R	I	M	R	F	G	F	T	P	L	Y	T	T	.	.	.	.	F	T	E
Template Known Secondary structure					T	T	S						S		S	.	S	G	G	G	B		S							T	T										T	T	T							T	.	.	.	.	.	.	.	.	.	.	T	T								T	T	T			.	.	.	.
Template Predicted Secondary structure																.																																			.	.	.	.	.	.	.	.	.	.															.	.	.	.
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.	.		.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370											.	.	.	.	.	.	.	.	.	380	.	.	.	.					.	.	.
		379	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	E	L	A	G	W	M	C	D	V	L	D	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	W	D	A	V	Q	I	L	G	E	I	L	D	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		388	.	390	.	.	.	.	.	.	.	.	.	400	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions