Job Description P0A825 Confidence 99.96% Date Thu Jan 5 11:06:42 GMT 2012 Rank 110 Aligned Residues 344 % Identity 13% Template d1pmma_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Pyridoxal-dependent decarboxylase Resolution 2.00

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.							.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.
Query Sequence		E	N	Y	T	S	P	R	V	M	Q	A	Q	G	S	Q	L	T	N	K	Y	A	E	G	Y	P	G	K	R	Y	Y	G	G	C	E	Y	V	D	I	V	E	Q	L	A	I	D	R	A	K	E	L	F	G	A	D	Y	A	.	.	.	.	.	.	N	V	Q	P	H	S	G	S	Q	A	N	F	A	V	Y	T	A	L
Query Conservation																																																										.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.																																		.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.
Template Sequence		Q	T	W	D	D	E	N	V	H	K	L	M	D	L	S	I	.	.	.	.	.	.	.	N	K	N	W	I	D	K	E	E	Y	P	Q	S	A	A	I	D	L	R	C	V	N	M	V	A	D	L	W	H	A	P	A	P	K	N	G	Q	A	V	G	T	N	T	I	G	S	S	E	A	C	M	L	G	G	M	A	M
Template Known Secondary structure																T	T	.	.	.	.	.	.	.	T		B	T	T		T	T	T	S																		T	T					T	T	S			S					S	S
Template Predicted Secondary structure																		.	.	.	.	.	.	.
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80								.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		110	.												.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.		.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.																																																																		.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.																																																																		.
Query Sequence		L	E	.	.	.	.	.	.	.	.	.	.	.	P	G	D	T	V	L	G	M	N	L	A	H	G	G	H	L	T	H	G	S	P	V	N	F	S	G	K	L	Y	N	I	V	P	Y	G	I	D	A	T	G	H	I	D	Y	A	D	L	E	K	Q	A	K	E	H	K	P	K	M	I	I	G	G	F	S	A	.	Y
Query Conservation				.	.	.	.	.	.	.	.	.	.	.																																																																		.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.												.	.																							.																														.
Template Conservation																										.	.																							.
Template Sequence		K	W	R	W	R	K	R	M	E	A	A	G	K	P	T	D	K	P	N	L	V	C	G	P	.	.	V	Q	I	C	W	H	K	F	A	R	Y	W	D	V	E	L	R	E	I	P	M	R	.	P	G	Q	L	F	M	D	P	K	R	M	I	E	A	C	D	E	N	T	I	G	V	V	P	T	F	G	V	T	Y	T
Template Known Secondary structure													T				S							S	S	.	.												T	T									B	.	T	T	B		S												T	T							B	B	S		T	T	T
Template Predicted Secondary structure																										.	.																							.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.			.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.							.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.					.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.																									.	.	.	.
Query SS confidence																			.	.	.	.	.	.																									.	.	.	.
Query Sequence		S	G	V	V	D	W	A	K	M	R	E	I	A	D	S	I	G	.	.	.	.	.	.	A	Y	L	F	V	D	M	A	H	V	A	G	L	V	A	A	G	V	Y	P	N	P	V	P	.	.	.	.	H	A	H	V	V	T	T	T	T	H	K	T	L	A	G	P	R	G	G	L	I	L	A	K	G	G	S	E	E
Query Conservation																			.	.	.	.	.	.																									.	.	.	.
Alig confidence																			.	.	.	.	.	.																									.	.	.	.
Template Conservation
Template Sequence		G	N	Y	E	F	P	Q	P	L	H	D	A	L	D	K	F	Q	A	D	T	G	I	D	I	D	M	H	I	D	A	A	S	G	G	F	L	A	P	F	V	A	P	D	I	V	W	D	F	R	L	P	R	V	K	S	I	S	A	S	G	H	K	F	G	L	A	P	L	G	C	G	W	V	I	W	R	D	E	E	A
Template Known Secondary structure			B	B																												T	T	G	G	G	T						T	T				S	T	T	S	T	T								T	T	T	T	T				S	S							S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
		248	.	250	.	.	.	.	.	.									.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.		.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.																																																			.
Query SS confidence											.	.	.	.	.	.	.	.																																																			.
Query Sequence		L	Y	K	K	L	N	S	A	V	.	.	.	.	.	.	.	.	F	P	G	G	Q	G	G	P	L	M	H	V	I	A	G	K	A	V	A	L	K	E	A	M	E	P	E	F	K	T	Y	Q	Q	Q	V	A	K	N	A	K	A	M	V	E	V	F	L	E	R	G	.	Y	K	V	V	S	G	G	T	D	N	H	L
Query Conservation											.	.	.	.	.	.	.	.																																																			.
Alig confidence											.	.	.	.	.	.	.	.																																																			.
Template Conservation
Template Sequence		L	P	Q	E	L	V	F	N	V	D	Y	L	G	G	Q	I	G	T	F	A	I	N	F	S	R	P	A	G	Q	V	I	A	Q	Y	Y	E	F	L	R	L	G	R	E	G	Y	T	K	V	Q	N	A	S	Y	Q	V	A	A	Y	L	A	D	E	I	A	K	L	G	P	Y	E	F	I	C	T	G	R	P	D	E	G
Template Known Secondary structure		S		G	G	G							T	T								S			S		B	S																																						T	T	S										T	T	T	B
Template Predicted Secondary structure
Template SS confidence
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
		319	320	.	.	.	.							.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure								.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.
Query Sequence		F	L	V	D	L	V	.	.	.	.	.	.	D	K	N	L	T	G	K	E	A	D	A	A	L	G	R	A	N	I	T	V	N	K	N	S	V	P	N	D	P	K	S	P	F	V	T	S	G	I	R	V	G	T	P	A	I	T	R	R	G	F	K	E	A	E	A	K	E	L	A	G	W	M	C	D	V	L	D	S
Query Conservation								.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.																																			.	.	.								.	.	.	.
Template Conservation																																																.	.	.								.	.	.	.
Template Sequence		I	P	A	V	C	F	K	L	K	D	G	E	D	P	G	Y	T	L	Y	D	L	S	E	R	L	R	L	R	G	W	Q	V	P	A	F	T	L	G	G	E	A	T	D	I	V	V	.	.	.	M	R	I	M	C	R	R	.	.	.	.	G	F	E	M	D	F	A	E	L	L	L	E	D	Y	K	A	S	L	K	Y
Template Known Secondary structure		S	S								T	T				S	S											T	T	T		B								T	T		T	T				.	.	.							T	.	.	.	.	T
Template Predicted Secondary structure																																																.	.	.								.	.	.	.
Template SS confidence
		375	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420				.	.	.	.	.	.	.					.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.
		393	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	N	D	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	S	D	H
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		448	.	450	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions