Job Description P0A825 Confidence 99.76% Date Thu Jan 5 11:06:42 GMT 2012 Rank 235 Aligned Residues 322 % Identity 13% Template d1ohwa_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.30

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.			.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure																																																	.	.																									.	.	.	.	.	.	.
Query SS confidence																																																	.	.																									.	.	.	.	.	.	.
Query Sequence		S	P	R	V	M	Q	A	Q	G	S	Q	L	T	N	K	Y	A	E	G	Y	P	G	K	R	Y	Y	G	G	C	E	Y	V	D	I	V	E	Q	L	A	I	D	R	A	K	E	L	F	.	.	G	A	D	Y	A	N	V	Q	P	H	S	G	S	Q	A	N	F	A	V	Y	T	A	L	L	.	.	.	.	.	.	.
Query Conservation																																																	.	.																									.	.	.	.	.	.	.
Alig confidence														.																		.	.	.															.	.						.																			.	.	.	.	.	.	.
Template Conservation														.																		.	.	.																						.
Template Sequence		H	P	A	L	V	K	L	V	Q	Q	P	Q	.	N	V	S	T	F	I	N	R	P	A	L	G	I	L	P	P	E	.	.	.	N	F	V	E	K	L	R	E	S	L	L	S	V	A	P	K	G	M	S	Q	L	.	I	T	M	A	C	G	S	C	S	N	E	N	A	F	K	T	I	F	M	W	Y	R	S	K	E
Template Known Secondary structure												G	G	.	G										T	T	T	S			T	.	.	.	T								T	G	G	G	G			T	T					.				S	S
Template Predicted Secondary structure														.																		.	.	.																						.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.		.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.				110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
																							111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	P	G	D	T	V	L	G	M	N	L	A	H	G	G	H	L	T	H	G	S	P	V	N	F	S	G	K	L	Y	N	I	V	P	Y	G	I	D	A	T	G	H	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.
Template Sequence		R	G	Q	S	A	F	S	K	E	E	L	E	T	C	M	I	N	Q	A	P	G	C	P	D	Y	S	I	L	S	F	M	G	A	F	H	G	.	.	R	T	M	G	C	L	A	T	T	H	S	K	A	I	H	K	I	D	I	P	S	F	D	W	P	I	A	P	F	P	R	L	K	Y	P	L	E	E	F	V	K	E
Template Known Secondary structure			T	T													T	T		T	T	T	S									T	T					.	.	S	S						T			S						T	T																S	S	G	G	G
Template Predicted Secondary structure																																						.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.			.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
												154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.			170	.	.	.	.			.	.	.	.	.	180	.	.					.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.		.	.	.	.	210	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																	.	.						.	.									.	.	.	.																								.
Query SS confidence		.	.	.	.	.	.	.	.	.	.																	.	.						.	.									.	.	.	.																								.
Query Sequence		.	.	.	.	.	.	.	.	.	.	D	Y	A	D	L	E	K	Q	A	K	E	H	K	P	K	M	.	.	I	I	G	G	F	.	.	S	A	Y	S	G	V	V	D	.	.	.	.	W	A	K	M	R	E	I	A	D	S	I	G	A	Y	L	F	V	D	M	A	H	V	A	.	G	L	V	A	A	G	V	Y	P
Query Conservation		.	.	.	.	.	.	.	.	.	.																	.	.						.	.									.	.	.	.																								.
Alig confidence		.	.	.	.	.	.	.	.	.	.																	.	.						.	.									.	.	.	.																								.
Template Conservation
Template Sequence		N	Q	Q	E	E	A	R	C	L	E	E	V	E	D	L	I	V	K	Y	R	K	K	K	K	T	V	A	G	I	I	V	E	P	I	Q	S	E	G	G	D	N	H	A	S	D	D	F	F	R	K	L	R	D	I	S	R	K	H	G	C	A	F	L	V	D	E	V	Q	T	G	G	G	S	T	G	K	F	W	A	H
Template Known Secondary structure																							T	T										S	S	B		T	T	T		B																	T	T								T	T	T		S	S	T	T	S	S	S	S	G	G
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
		215	.	.	.	.				220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure							.	.	.
Query SS confidence							.	.	.
Query Sequence		N	P	V	P	H	.	.	.	A	H	V	V	T	T	T	T	H	K	T	L	A	G	P	R	G	G	L	I	L	A	K	G	G	S	E	E	L	Y	K	K	L	N	S	A	V	F	P	G	G	Q	G	G	P	L	M	H	V	I	A	G	K	A	V	A	L	K	E	A	M	E	P	E	F	K	T	Y	Q	Q	Q	V
Query Conservation							.	.	.
Alig confidence							.	.	.																										.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.
Template Sequence		E	H	W	G	L	D	D	P	A	D	V	M	T	F	S	K	K	M	M	T	G	G	F	F	H	K	E	E	F	R	P	N	A	.	.	.	.	.	.	.	.	.	P	Y	R	I	F	N	T	W	L	G	D	P	S	K	N	L	L	L	A	E	V	I	N	I	I	K	R	E	D	L	L	S	N	A	A	H	A	G
Template Known Secondary structure		G	G	G			S	S			S						G	G	G	S	S							G	G	G	S		S	S	.	.	.	.	.	.	.	.	.	T	T	S	S			S		S	S																		T	T
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.
Template SS confidence
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.										.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	N	A	K	A	M	V	E	V	F	L	E	R	G	Y	K	V	V	S	G	G	T	D	N	H	L	F	L	V	D	L	V	D	K	N	L	T	G	K	E	A	D	A	A	L	G	R	A	N	I	T	V	N	K	N	S	V	P	N	D	P	K	S	P	F	V	T	S	G	I	R	V	G	T	P	A	I	T	R
Query Conservation
Alig confidence																																		.																								.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.																								.	.	.	.	.	.	.	.	.	.
Template Sequence		K	V	L	L	T	G	L	L	D	L	Q	A	R	Y	P	Q	F	I	S	R	V	R	G	R	G	T	F	C	S	F	D	T	.	P	D	E	S	I	R	N	K	L	I	S	I	A	R	N	K	G	V	M	L	G	G	C	.	.	.	.	.	.	.	.	.	.	G	D	K	S	I	R	F	R	P	T	L	V	F	R
Template Known Secondary structure																T	T	T								T	T							.	S	S														T	T							.	.	.	.	.	.	.	.	.	.	T	T	T								T	T
Template Predicted Secondary structure																																		.																								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.		.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.											440	.	.	.	.	.	.	.	.	.	450	.	.	.
		372	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	F	K	E	A	E	A	K	E	L	A	G	W	M	C	D	V	L	D	S
Query Conservation
Alig confidence		.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	D	H	H	A	H	L	F	L	N	I	F	S	D	I	L	A	D
Template Known Secondary structure		.	.	.	.																	T
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						454	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions