Return to main results Retrieve Phyre Job Id

Job DescriptionP0A825
Confidence99.97%DateThu Jan 5 11:06:42 GMT 2012
Rank60Aligned Residues369
% Identity11%Templated1js3a_
SCOP infoPLP-dependent transferase-like PLP-dependent transferases Pyridoxal-dependent decarboxylase
Resolution2.25

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.... .....50.........60.........70.........80
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Query Sequence  KREMNIADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVM. . QAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAID
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Template Sequence  QEPDTFEDILQDVEKIIMPGVTHWHSPYFFAYFPTASSYPAMLADMLCGAI. . . . . . . GCIGFSWAASPACTELETVMMD
Template Known Secondary structure  SS


TTGGG


TTSTTB
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SSGGG
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   48.50.........60.........70.........80.........90........ .100.........110.........120
 
   81........90. ........100.........110. ........120.........130.
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Query Sequence  RAKELFGADYA. . . . . . . . . . NVQPHSGSQANFAVYTALLE. . . . . . . . . . . . . . . . . . . PGDTVLGMNLAHGGHLTHGS
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Template Sequence  WLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRLQAASPGLTQGAVLEKLVAYASDQAH. . . SSVER
Template Known Secondary structure  TT

GGG

TTT
S
S
STT

TT

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   121........130.........140.........150.........160.........170.........180.........190.. .....
 
   132.......140.........150.........160...... ...170.........180.........190.........200....
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Query Sequence  PVNFSGKLYNIVPYGIDATGHIDYADLEKQAKEHK. . . . . . . PKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMAHV
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Template Sequence  AGLIGGVKLKAIP. . SDGKFAMRASALQEALERDKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICHEEDIWLHVDAAYA
Template Known Secondary structure  T

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TTS


TT
BS
TTT

B

TT

TTG
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   198.200.........210 .........220.........230.........240.........250.........260.........270.....
 
   205....210......... 220.........230.........240.........250........ .260.........270.......
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Query Sequence  AGLVAAGVYPNPVPH. . . AHVVTTTTHKTLAGPRGGLILAKGGSEELYKKLNSAVFP. . . . GGQGGPLMHVIAGKAVALK
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Template Sequence  GSAFICPEFRHLLNGVEFADSFNFNPHKWLLVNFDCSAMWVKRRTDLTGAFKSGLITDYRHWQLPLGRRFRSLKMWFVFR
Template Known Secondary structure  GGGGGSTTTGGGGTTGGG
S
SS

SS
S
GGG


S


GGGSSS
S



T
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   276...280.........290.........300.........310.........320.........330.........340.........350.....
 
   278.280.........290.........300..... ....310.........320.........330.........340.........350......
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Query Sequence  EAMEPEFKTYQQQVAKNAKAMVEVFLER. GYKVVSGGTDNHLFLVDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSP
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Template Sequence  MYGVKGLQAYIRKHVQLSHEFEAFVLQDPRFEVCAEV. TLGLVCFRLKGSDGLNEALLERINSARKIH. . . . . . LVPCRL
Template Known Secondary structure 
TT
S

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SSSS
TS
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   368.370.........380.........390.........400.... .....410.........420.........430.... .....440
 
   357..360.........370.........380.........390...
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Query Sequence  FVTSGIRVGTPAITRRGFKEAEAKELAGWMCDVLDSI
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Template Sequence  RGQFVLRFAICSRKV. . . ESGHVRLAWEHIRGLAAEL
Template Known Secondary structure  TT


TT
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   441........450..... ....460.........470....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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