Return to main results Retrieve Phyre Job Id

Job DescriptionP0A825
Confidence99.98%DateThu Jan 5 11:06:42 GMT 2012
Rank44Aligned Residues347
% Identity15%Templated1h0ca_
SCOP infoPLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like
Resolution2.5

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   17..20.........30.........40.........50.........60.........70.........80......... 90....
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Query Sequence  QAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGAD. . YANVQ
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Template Sequence  KALLKPLSIPNQLL. LGPGPSNLPPRIMAAGGLQMIGSMS. . . . . . . . . . . . KDMYQIMDEIKEGIQYVFQTRNPLTLVI
Template Known Secondary structure  GGGGS






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SSS




T




TTS............T


S
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   12.......20..... ....30.........40.........50 .........60.........70........
 
   95....100.........110.........120.........130.........140.........150.........160.........170....
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Query Sequence  PHSGSQANFAVYTALLEPGDTVLGMNLAHGGHLTHGSPVNFSGKLYNIVPYGIDATGHIDYADLEKQAKEHKPKMIIGGF
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Template Sequence  SGSGHCALEAALVNVLEPGDSFLVGANGIWGQRAVDIGERI. . . . . GVHPMTKDPGGHYTLQEVEEGLAQHKPVLLFLTH
Template Known Secondary structure  SS


SS


BSS.....

B

B

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   7980.........90.........100.........110......... 120.........130.........140.........150...
 
   175....180.........190.........200.........210.........220.........230.........240....
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Query Sequence  . . SAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLILAKGG. . . . . . . .
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Template Sequence  GESSTGVLQPLDGFGELCHRYKCLLLVDSVASLGGTPLYM. . . DRQGIDILYSGSQKALNAPPGTSLISFSDKAKKKMYS
Template Known Secondary structure  TTTT


TTTTT

TTTTTTS


T...TTTT
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   156...160.........170.........180.........190..... ....200.........210.........220.........230..
 
   245....250.........260.........270.........280.........290.........300.........310..
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Query Sequence  . . . . . . . . . . . . SEELYKKLNSAVFPGGQGGPLMHVIAGKAVALKEAMEPEFKTYQQQVAKNAKAMVEVFLERGYKVVSG
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Template Conservation        
                       
                                      
          
Template Sequence  RKTKPFSFYLDIKWLANFWGCDDQPRMYHHTIPVISLYSLRESLALIAEQGLENSWRQHREAAAYLHGRLQALGLQLFVK
Template Known Secondary structure 
SS

S
STT
TT
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S



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   233......240.........250.........260.........270.........280.........290.........300.........310..
 
   313.. ....320.........330.........340 .........350.........360.........370.........380........
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Query Sequence  GTD. . . NHLFLVDLVDKNLTGKEADAALGRA. NITVNKNSVPNDPKSPFVTSGIRVGTPAITRRGFKEAEAKELAGWMCD
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Template Sequence  DPALRLPTVTTVAV. PAGYDWRDIVSYVIDHFDIEIMGGLGPSTGKV. . . . . . LRIGLLGCNA. . . TRENVDRVTEALRA
Template Known Secondary structure  SGGGB
TT
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GGGTTT......

GGG
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   313......320...... ...330.........340.........350........ .360........ .370.........380..
 
   389390....
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Query Sequence  VLDSIN
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Template Sequence  ALQHCP
Template Known Secondary structure  S
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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