Return to main results Retrieve Phyre Job Id

Job DescriptionP0A825
Confidence100.00%DateThu Jan 5 11:06:42 GMT 2012
Rank1Aligned Residues416
% Identity100%Templated1dfoa_
SCOP infoPLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  LKREMNIADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDR
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Template Sequence  LKREMNIADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDR
Template Known Secondary structure 

TT


S

TT




TSGGGG



TTSSS

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   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  AKELFGADYANVQPHSGSQANFAVYTALLEPGDTVLGMNLAHGGHLTHGSPVNFSGKLYNIVPYGIDATGHIDYADLEKQ
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Template Sequence  AKELFGADYANVQPHSGSQANFAVYTALLEPGDTVLGMNLAHGGHLTHGSPVNFSGKLYNIVPYGIDATGHIDYADLEKQ
Template Known Secondary structure  T
S


SS

TT

TTTT

GGGT
TTSS
B
SSSSB
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   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  AKEHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLILA
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Template Conservation         

       
   

  
  

   
  



 
   
              
    
  
 
 
   
 
  
Template Sequence  AKEHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLILA
Template Known Secondary structure 

S
SS

S


TT

TTTTSS


TTTSSSSSTT


S
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   162.......170.........180.........190.........200.........210.........220.........230.........240.
 
   242.......250.........260.........270.........280.........290.........300.........310.........320.
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Query Sequence  KGGSEELYKKLNSAVFPGGQGGPLMHVIAGKAVALKEAMEPEFKTYQQQVAKNAKAMVEVFLERGYKVVSGGTDNHLFLV
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Template Conservation                               

   
                     
   
   
               
Template Sequence  KGGSEELYKKLNSAVFPGGQGGPLMHVIAGKAVALKEAMEPEFKTYQQQVAKNAKAMVEVFLERGYKVVSGGTDNHLFLV
Template Known Secondary structure  SS

TTTT
SS

TTSTT
GGGS
SSS
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   242.......250.........260.........270.........280.........290.........300.........310.........320.
 
   322.......330.........340.........350.........360.........370.........380.........390.........400.
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Query Sequence  DLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRVGTPAITRRGFKEAEAKELAGWMCDVLDSINDEAVIER
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Template Conservation                 
   

 
     
           


     
  
    
    
  
   
           
Template Sequence  DLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRVGTPAITRRGFKEAEAKELAGWMCDVLDSINDEAVIER
Template Known Secondary structure 
GGGT

TT



TT
SS
TTT
S
TT

TTT
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   322.......330.........340.........350.........360.........370.........380.........390.........400.
 
   402.......410.......
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Query Sequence  IKGKVLDICARYPVYA
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Template Conservation      
  
    
   
Template Sequence  IKGKVLDICARYPVYA
Template Known Secondary structure  S
S

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   402.......410.......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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