Return to main results Retrieve Phyre Job Id

Job DescriptionP0A825
Confidence99.96%DateThu Jan 5 11:06:42 GMT 2012
Rank111Aligned Residues343
% Identity13%Templated1d2fa_
SCOP infoPLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2930....... ..40.........50.........60.........70.........80....... ..90........ .100...
Predicted Secondary structure 





..
















..




.
Query SS confidence 








. .

















































. .










.




Query Sequence  HIELIASEN. . YTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFG. . ADYANVQPHSG. SQANF
Query Conservation   
 
    
..  

 
  
        
           
               
 
 
..     
   

.
 
  
Alig confidence 








..













.......











.















..










.




Template Conservation   
 
  
      
  
  
   
 .......      
     .  

 


               
  
 
 
  
 
Template Sequence  LLPFTISDMDFATAPCIIEALNQRL. . . . . . . MHGVFGYSRWKN. DEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVS
Template Known Secondary structure 


SSS
SS


.......TT






S

.S




GGGS
Template Predicted Secondary structure 













.......










.






Template SS confidence 















































































   30.........40.........50.... .....60...... ...70.........80.........90.........100.
 
   104.....110.........120.........130.........140......... 150.........160.........170.........
Predicted Secondary structure 























.

















...
Query SS confidence 













































.





























. . .
Query Sequence  AVYTALLEPGDTVLGMNLAHGGHLTHGSPVNFSGKLYNIVPYGIDA. TGHIDYADLEKQAKEHKPKMIIGGFSAYSG. . .
Query Conservation    
 

  


 
           
        
            .    
 
 
          

    
  
 ...
Alig confidence 




















...





















.





























...
Template Conservation           

 

   
   ...         
                                          
   
Template Sequence  ELIRQWSETGEGVVIHTPAYD. . . AFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKV
Template Known Secondary structure  SS
TT
S

...TT


SSS

TSTTSS
TTT


Template Predicted Secondary structure 







...































Template SS confidence 















































































   102.......110.........120.. .......130.........140.........150.........160.........170........
 
   180.........190.........200.........210........ .220.........230.. .......240.........250..
Predicted Secondary structure  ..




















...









..







Query SS confidence  . .






































. . .













. .



















Query Sequence  . . VVDWAKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPVP. . . HAHVVTTTTHKTLA. . GPRGGLILAKGGSEELYKKL
Query Conservation  ..  

  
  

   
  



 
   
            ...  
    
  
 
 ..
  

 
             
Alig confidence  ..






































...













..



















Template Conservation       
  
          

 
                            
 

     


 
               
Template Sequence  WTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWALLTSGSKSFNIPALTGAYGIIENSSSRDAYLS
Template Known Secondary structure 

TTTT

TTTT
B
SSS



GGGT

SS
ST
GGG


S
Template Predicted Secondary structure 






























Template SS confidence 















































































   179180.........190.........200.........210.........220.........230.........240.........250........
 
   253......260.........270.........280.........290.........300.........310..... ....320.........330.
Predicted Secondary structure 






















.







Query SS confidence 






























































.















Query Sequence  NSAVFPGGQGGPLMHVIAGKAVALKEAMEPEFKTYQQQVAKNAKAMVEVFLERGYKVVSGGTD. NHLFLVDLVDKNLTGK
Query Conservation                   

                          
   
   
  
      .                
Alig confidence 


























..

































.















Template Conservation                   
         ..                                
         
        
Template Sequence  ALKGRDGLSSPSVLALTAHIAAYQQGA. . PWLDALRIYLKDNLTYIADKMNAAFPELNWQIPQSTYLAWLDLRPLNIDDN
Template Known Secondary structure  TTS


S


..
SS





SB
S
GGG


Template Predicted Secondary structure 








..


















Template SS confidence 















































































   259260.........270.........280..... ....290.........300.........310.........320.........330......
 
   332..... ..340.........350.........360.........370.........380.........390....
Predicted Secondary structure  .

























Query SS confidence 





.
























































Query Sequence  EADAAL. GRANITVNKNSVPNDPKSPFVTSGIRVGTPAITRRGFKEAEAKELAGWMCDVLDSIN
Query Conservation       
.   

 
     
           


     
  
    

   
  
   
    
Alig confidence 





.






....

















......





















Template Conservation       
    

 
.... 

  
       



 ......      
  

  
  

   
Template Sequence  ALQKALIEQEKVAI. . . . MPGYTYGEEGRGFVRLNA. . . . . . GCPRSKLEKGVAGLINAIRAVR
Template Known Secondary structure  TT

....GGGG
GGGTT
......
S

Template Predicted Secondary structure 

....






......



Template SS confidence 































































   337..340.........350 .........360........ .370.........380.........390
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions