Job Description P0A825 Confidence 99.94% Date Thu Jan 5 11:06:42 GMT 2012 Rank 176 Aligned Residues 314 % Identity 17% Template d1cl1a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 1.83

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	Q	A	Q	G	S	Q	L	T	N	K	Y	A	E	G	Y	P	G	K	R	Y	Y	G	G	C	E	Y	V	D	I	V	E	Q	L	A	I	D	R	A	K	E	L	F	G	A	D	Y	A	N	V	Q	P	H	S	G	S	Q	A	N	F	A	V	Y	T	A	L	L	E	P	G	D	T	V	L	G	M	N	L	A	H
Query Conservation
Alig confidence																												.	.	.	.	.	.																	.
Template Conservation																												.	.	.	.	.	.																	.
Template Sequence		V	E	A	K	K	H	A	T	R	N	R	A	N	G	E	L	F	Y	G	R	R	G	T	L	T	H	.	.	.	.	.	.	F	S	L	Q	Q	A	M	C	E	L	E	G	G	A	G	C	.	V	L	F	P	C	G	A	A	A	V	A	N	S	I	L	A	F	I	E	Q	G	D	H	V	L	M	T	N	T	A	Y
Template Known Secondary structure											T	T	T	T	T					T	T	T						.	.	.	.	.	.												T		S			.				S	S															T	T							T	T	S
Template Predicted Secondary structure																												.	.	.	.	.	.																	.
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.							.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80		.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		124	.	.	.	.	.	130	.	.		.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.		.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.			.	.	.	.	.	.	.
Predicted Secondary structure											.																																											.																			.	.
Query SS confidence											.																																											.																			.	.
Query Sequence		G	G	H	L	T	H	G	S	P	.	V	N	F	S	G	K	L	Y	N	I	V	P	Y	G	I	D	A	T	G	H	I	D	Y	A	D	L	E	K	Q	A	K	E	H	K	P	K	M	I	I	G	G	F	.	S	A	Y	S	G	V	V	D	W	A	K	M	R	E	I	A	D	S	.	.	I	G	A	Y	L	F	V
Query Conservation											.																																											.																			.	.
Alig confidence											.															.	.	.	.	.	.	.																						.																			.	.
Template Conservation																										.	.	.	.	.	.	.
Template Sequence		E	P	S	Q	D	F	C	S	K	I	L	S	K	L	G	V	T	T	S	W	F	D	P	L	.	.	.	.	.	.	.	I	G	A	D	I	V	K	H	L	Q	P	N	T	K	I	V	F	L	E	S	P	G	S	I	T	M	E	V	H	D	V	P	A	I	V	A	A	V	R	S	V	V	P	D	A	I	I	M	I
Template Known Secondary structure											T	G	G	G	G	T								T	T	.	.	.	.	.	.	.		G	G	G	G	G	G	T			T	T								S	S		T	T	T																		T	T
Template Predicted Secondary structure																										.	.	.	.	.	.	.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.								.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.			.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.
Query SS confidence																																							.	.
Query Sequence		D	M	A	H	V	A	G	L	V	A	A	G	V	Y	P	N	P	V	P	H	A	H	V	V	T	T	T	T	H	K	T	L	A	G	P	R	G	.	.	G	L	I	L	A	K	G	G	S	E	E	L	Y	K	K	L	N	S	A	V	F	P	G	G	Q	G	G	P	L	M	H	V	I	A	G	K	A	V	A	L	K
Query Conservation																																							.	.
Alig confidence																	.	.	.	.																			.	.																											.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.																																															.	.	.	.	.	.	.	.	.
Template Sequence		D	N	T	W	A	A	G	V	L	F	K	A	L	D	F	.	.	.	.	G	I	D	V	S	I	Q	A	A	T	Y	L	V	G	H	S	D	A	M	I	G	T	A	V	C	N	A	R	C	W	E	Q	L	R	E	N	A	Y	L	M	G	Q	M	V	D	A	.	.	.	.	.	.	.	.	.	D	T	A	Y	I	T
Template Known Secondary structure				T	T	T	T	T	T	S	S		G	G	G	G	.	.	.	.	T		S										S		S	S	S										T	T	T											T	T						.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																	.	.	.	.																																															.	.	.	.	.	.	.	.	.
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.					200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.										.	.	.	.	250	.
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.			.	.	310	.	.	.	.	.	.	.																.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure																																.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	A	M	E	P	E	F	K	T	Y	Q	Q	Q	V	A	K	N	A	K	A	M	V	E	V	F	L	E	R	G	Y	.	.	K	V	V	S	G	G	T	D	N	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	F	L	V	D	L	V	D	K	N	L	T	G	K	E	A	D	A	A	L	G	R	A
Query Conservation																																.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Template Conservation																																																																	.
Template Sequence		S	R	G	L	R	T	L	G	V	R	L	R	Q	H	H	E	S	S	L	K	V	A	E	W	L	A	E	H	P	Q	V	A	R	V	N	H	P	A	L	P	G	S	K	G	H	E	F	W	K	R	D	F	T	G	S	S	G	L	F	S	F	V	L	.	K	K	K	L	N	N	E	E	L	A	N	Y	L	D	N	F
Template Known Secondary structure						T	T																					T		T	T							T	T	S	T	T	S	T	T									S				S							.	S	S												T	T
Template Predicted Secondary structure																																																																	.
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.		.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
		341	.	.	.	.	.	.	.	.																			350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	I	T	V	N	K	N	S	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	N	D	P	K	S	P	F	V	T	S	G	I	R	V	G	T	P	A	I	T	R	R	G	F	K	E	A	E	A	K	E	L	A	G	W	M	C	D	V	L	D	S	I
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.	.
Template Sequence		S	L	F	S	M	A	Y	S	W	G	G	Y	E	S	L	I	L	A	N	Q	P	E	H	I	A	A	I	R	P	Q	G	E	I	D	F	S	G	T	L	I	R	L	H	I	G	L	.	.	.	.	.	.	.	.	E	D	V	D	D	L	I	A	D	L	D	A	G	F	A	R	I
Template Known Secondary structure		S	S		B			S				S	S	S														T	S	T	T							S									S	.	.	.	.	.	.	.	.	S																T
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.
Template SS confidence
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.									.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions