Job Description P0A825 Confidence 99.96% Date Thu Jan 5 11:06:42 GMT 2012 Rank 125 Aligned Residues 362 % Identity 14% Template c3t18D_ PDB info PDB header:transferase Chain: D: PDB Molecule:aminotransferase class i and ii; PDBTitle: crystal structure of aminotransferase from anaerococcus prevotii dsm2 20548. Resolution 2.86 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.						.	.	.	.	30	.	.	.	.	.						.	.			.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.											.	.	.	.	.			.	.
Query SS confidence																										.	.	.	.	.											.	.	.	.	.			.	.
Query Sequence		L	K	R	E	M	N	I	A	D	Y	D	A	E	L	W	Q	A	M	E	Q	E	K	V	R	.	.	.	.	.	Q	E	E	H	I	E	L	I	A	S	.	.	.	.	.	E	N	.	.	Y	T	S	P	R	V	M	Q	A	Q	G	S	Q	L	T	N	K	Y	A	E	G	Y	P	G	K	R	Y	Y	G	G	C	E
Query Conservation																										.	.	.	.	.											.	.	.	.	.			.	.
Alig confidence							.																			.	.	.	.	.											.	.	.	.	.			.	.															.	.	.	.	.	.	.
Template Conservation							.																																																									.	.	.	.	.	.	.
Template Sequence		I	K	R	A	T	.	W	N	N	G	P	D	L	A	F	D	I	N	N	K	A	N	A	A	I	E	K	Y	G	R	E	A	V	I	N	A	A	L	G	T	L	L	D	D	K	G	K	I	I	A	L	P	S	V	Y	D	R	L	D	E	X	D	.	.	.	.	.	.	.	R	S	H	I	A	S	Y	A	P	I	E
Template Known Secondary structure			T	T	T		.																								G	G	G						S				B		T	T	S		B												T	S		.	.	.	.	.	.	.	G	G	G	T	S	S				T	T
Template Predicted Secondary structure							.																																																									.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.								.	.	.	.	70	.	.	.	.	.	.
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.			.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.
Query SS confidence																									.	.
Query Sequence		Y	V	D	I	V	E	Q	L	A	I	D	R	A	K	E	L	F	G	A	D	Y	A	N	.	.	V	Q	P	H	S	G	S	Q	A	N	F	A	V	Y	T	A	L	L	E	P	G	D	T	V	L	G	M	N	L	A	H	G	G	H	L	T	H	G	S	P	V	N	F	S	G	K	L	Y	N	I	V	P	Y	G	I
Query Conservation																									.	.
Alig confidence																									.	.
Template Conservation
Template Sequence		G	E	K	D	Y	R	K	I	V	I	D	T	L	F	G	P	Y	K	P	E	G	Y	I	S	A	I	A	T	P	G	G	T	G	A	I	R	S	A	I	F	S	Y	L	D	E	G	D	P	L	I	C	H	D	Y	Y	W	A	P	Y	R	K	I	C	E	E	F	G	R	N	F	K	T	F	E	F	F	T	D	D	F
Template Known Secondary structure																G	G	G			S	S								S													T	S		S	S							S	S			T										T									B		S	S	S
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.				.	.	.	.	.	.	.	180	.				.	.	.	.	.	.	.	.	190	.	.							.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure																											.	.	.										.	.	.												.	.	.	.	.	.
Query SS confidence																											.	.	.										.	.	.												.	.	.	.	.	.
Query Sequence		D	A	T	G	H	I	D	Y	A	D	L	E	K	Q	A	K	E	H	K	P	K	M	I	I	G	.	.	.	G	F	S	A	Y	S	G	V	V	.	.	.	D	W	A	K	M	R	E	I	A	D	S	.	.	.	.	.	.	I	G	A	Y	L	F	V	D	M	A	H	V	A	G	L	V	A	A	G	V	Y	P	N
Query Conservation																											.	.	.										.	.	.												.	.	.	.	.	.
Alig confidence																											.	.	.										.	.	.												.	.	.	.	.	.
Template Conservation
Template Sequence		A	F	N	I	D	V	Y	K	E	A	I	D	E	G	I	R	D	S	D	R	I	A	S	L	I	N	S	P	G	N	N	P	T	G	Y	S	L	S	D	E	E	W	D	E	V	I	T	F	L	K	E	K	A	E	D	K	D	K	K	I	T	L	I	V	D	V	A	Y	L	E	F	A	G	D	G	D	Q	Q	R	K
Template Known Secondary structure		S	B															S		S									S	S		T	T	T														T	T	T	T	T	T	T	T	S	T	T										T	T		T	T	S	S	S	S	S	S	S	S	T
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		216	.	.	.	220	.									.	.	.	.	.	.	.	.	230	.			.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.											.	.																																																					.	.
Query SS confidence								.	.	.	.	.	.	.	.											.	.																																																					.	.
Query Sequence		P	V	P	H	A	H	.	.	.	.	.	.	.	.	V	V	T	T	T	T	H	K	T	L	.	.	A	G	P	R	G	G	L	I	L	A	K	G	G	S	E	E	L	Y	K	K	L	N	S	A	V	F	P	G	G	Q	G	G	P	L	M	H	V	I	A	G	K	A	V	A	L	K	E	A	M	E	P	E	.	.
Query Conservation								.	.	.	.	.	.	.	.											.	.																																																					.	.
Alig confidence								.	.	.	.	.	.	.	.											.	.																																																					.	.
Template Conservation
Template Sequence		F	F	E	K	F	S	N	L	P	R	N	L	F	V	V	V	A	F	S	X	S	K	S	H	T	A	Y	G	L	R	S	G	A	A	V	G	I	S	S	S	K	E	I	I	E	E	F	E	A	S	L	A	H	S	A	R	C	N	W	S	N	G	T	H	A	A	Q	N	I	L	I	E	L	E	R	A	E	N	K	K
Template Known Secondary structure		T	T	G	G	G	S	S			T	T														T		G	G	G										S																				T	S	S							T	T	T	S	S	T	T	S	G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
							284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	F	K	T	Y	Q	Q	Q	V	A	K	N	A	K	A	M	V	E	V	F	L	E	R	G	Y	K	V	V	S	G	G	T	D	N	H	L	F	L	V	D	L	V	D	K	N	L	T	G	K	E	A	D	A	A	L	G	R	A	N	I	T	V	N	K	N	S	V	P	N	D	P	K	S	P	F	V
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.																																.										.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.										.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	Y	E	Q	E	L	V	D	L	R	N	X	L	K	S	R	A	D	V	F	V	T	A	A	K	E	N	K	L	T	X	I	P	Y	F	G	.	G	F	F	T	F	I	P	T	D	.	.	.	.	K	A	F	D	I	V	K	D	L	E	K	E	N	I	F	T	I	P	S	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																													T								S	.	S	S							S	.	.	.	.											T	T	T							.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																						.										.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.		.	.	.	.	.	.	.	360	.					.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
		359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	S	G	I	R	V	G	T	P	A	I	T	R	R	G	F	K	E	A	E	A	K	E	L	A	G	W	M	C	D	V	L	D	S
Query Conservation
Alig confidence											.	.	.	.	.
Template Conservation											.	.	.	.	.
Template Sequence		A	K	G	I	R	V	A	I	C	.	.	.	.	.	G	V	G	E	E	K	I	P	K	L	V	Q	R	L	A	F	Y	T	N	K
Template Known Secondary structure		S	S						S	T	.	.	.	.	.	T	S		T	T	T
Template Predicted Secondary structure											.	.	.	.	.
Template SS confidence
		381	.	.	.	.	.	.	.	.						390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low