Job Description P0A825 Confidence 99.92% Date Thu Jan 5 11:06:42 GMT 2012 Rank 207 Aligned Residues 323 % Identity 13% Template c3ruyB_ PDB info PDB header:transferase Chain: B: PDB Molecule:ornithine aminotransferase; PDBTitle: crystal structure of the ornithine-oxo acid transaminase rocd from2 bacillus anthracis Resolution 2.65 Å

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		26	.	.	.	30	.	.	.	.	.			.	.	.	.				40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure												.	.					.	.	.
Query SS confidence												.	.					.	.	.
Query Sequence		Q	E	E	H	I	E	L	I	A	S	.	.	E	N	Y	T	.	.	.	S	P	R	V	M	Q	A	Q	G	S	Q	L	T	N	K	Y	A	E	G	Y	P	G	K	R	Y	Y	G	G	C	E	Y	V	D	I	V	E	Q	L	A	I	D	R	A	K	E	L	F	G	A	D	Y	A	N	V	Q	P	H	S	G	S	Q
Query Conservation												.	.					.	.	.
Alig confidence												.	.					.	.	.													.																		.	.	.	.	.	.	.	.															.
Template Conservation																																	.																		.	.	.	.	.	.	.	.															.
Template Sequence		G	N	R	Y	M	D	L	L	S	A	Y	S	A	V	N	Q	G	H	R	H	P	K	I	I	N	A	L	I	D	Q	A	.	N	R	V	T	L	T	S	R	A	F	H	S	D	Q	L	G	P	.	.	.	.	.	.	.	.	W	Y	E	K	V	A	K	L	T	N	K	E	M	V	.	L	P	M	N	T	G	A	E
Template Known Secondary structure								S	S					T		T	T		B	T												T	.	T	T		S				T	T	S			S	S				.	.	.	.	.	.	.	.										T		S			.				S	S
Template Predicted Secondary structure																																	.																		.	.	.	.	.	.	.	.															.
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.									.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.
		101	.	.	.	.	.	.	.	.	110	.	.	.											.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.													140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	N	F	A	V	Y	T	A	L	L	E	P	G	.	.	.	.	.	.	.	.	.	.	D	T	V	L	G	M	N	L	A	H	G	G	H	L	T	H	G	S	P	V	N	F	S	G	K	L	.	.	.	.	.	.	.	.	.	.	.	.	Y	N	I	V	P	Y	G	I	D	A	T	G	H	I	D	Y	A	D	L
Query Conservation															.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.													.	.													.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.
Template Conservation																																					.	.																																.	.	.	.	.	.	.
Template Sequence		A	V	E	T	A	I	K	T	A	R	R	W	A	Y	D	V	K	K	V	E	A	N	R	A	E	I	I	V	C	E	D	N	F	H	G	.	.	R	T	M	G	A	V	S	M	S	S	N	E	E	Y	K	R	G	F	G	P	M	L	P	G	I	I	V	I	P	Y	G	.	.	.	.	.	.	.	D	L	E	A	L
Template Known Secondary structure																	T	S				T	T								T	T					.	.	S	S					T	T		S		T	T	T	T	T	T			S			S	S						T	T	.	.	.	.	.	.	.
Template Predicted Secondary structure																																					.	.																																.	.	.	.	.	.	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.			.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.								.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.		.	.	.	.	.	180	.	.					.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.		.
Predicted Secondary structure																		.									.	.	.	.																																																		.
Query SS confidence																		.									.	.	.	.																																																		.
Query Sequence		E	K	Q	A	K	E	H	K	P	K	M	I	I	G	G	F	.	S	A	Y	S	G	V	V	D	.	.	.	.	W	A	K	M	R	E	I	A	D	S	I	G	A	Y	L	F	V	D	M	A	H	V	A	G	L	V	A	A	G	V	Y	P	N	P	V	P	H	A	H	V	V	T	T	T	T	H	K	T	L	.	A
Query Conservation																		.									.	.	.	.																																																		.
Alig confidence																		.									.	.	.	.																																																		.
Template Conservation
Template Sequence		K	A	A	I	T	P	N	T	A	A	F	I	L	E	P	I	Q	G	E	A	G	I	N	I	P	P	A	G	F	L	K	E	A	L	E	V	C	K	K	E	N	V	L	F	V	A	D	E	I	Q	T	G	L	G	R	T	G	K	V	F	A	C	D	W	D	N	V	T	P	D	M	Y	I	L	G	A	L	G	G	G
Template Known Secondary structure							T	T								S	S	B	T	T	T	T	S	B				T	T												T	T								T	T	T	T	T	T	T	T	S	S	S	S	G	G	G	G	G	T				S							T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	P	R	G	G	L	I	L	A	K	G	G	S	E	E	L	Y	K	K	L	N	S	A	V	F	P	G	G	Q	G	G	P	L	M	H	V	I	A	G	K	A	V	A	L	K	E	A	M	E	P	E	F	K	T	Y	Q	Q	Q	V	A	K	N	A	K	A	M	V	E	V	F	L	E	R	G	Y	K	V	V	S	G
Query Conservation
Alig confidence													.	.	.																																			.	.	.	.
Template Conservation													.	.	.																																			.	.	.	.
Template Sequence		V	F	P	I	S	C	A	A	A	N	R	.	.	.	D	I	L	G	V	F	E	P	G	S	H	G	S	T	F	G	G	N	P	L	A	C	A	V	S	I	A	A	L	E	V	L	E	E	.	.	.	.	E	K	L	T	E	R	S	L	Q	L	G	E	K	L	V	G	Q	L	K	E	I	D	N	P	M	I	T	E
Template Known Secondary structure		T	S										.	.	.				T	T			T	T	S	S			S	S	T	T																		.	.	.	.	T	T																	T	T				T	T
Template Predicted Secondary structure													.	.	.																																			.	.	.	.
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.				.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.					.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	D	N	H	L	F	L	V	D	L	V	D	K	N	L	T	G	K	E	A	D	A	A	L	G	R	A	N	I	T	V	N	K	N	S	V	P	N	D	P	K	S	P	F	V	T	S	G	I	R	V	G	T	P	A	I	T	R	R	G	F	K	E	A	E	A	K	E	L	A	G	W	M	C	D	V	L
Query Conservation
Alig confidence																.	.																				.	.	.	.	.	.	.	.	.	.															.	.	.	.
Template Conservation																.	.																				.	.	.	.	.	.	.	.	.	.															.	.	.	.
Template Sequence		V	R	G	K	G	L	F	I	G	I	E	L	N	E	.	.	P	A	R	P	Y	C	E	Q	L	K	A	A	G	L	L	C	K	E	T	.	.	.	.	.	.	.	.	.	.	H	E	N	V	I	R	I	A	P	P	L	V	I	S	.	.	.	.	E	E	D	L	E	W	A	F	Q	K	I	K	A	V	L
Template Known Secondary structure						T	T							S	S	.	.		S											T							.	.	.	.	.	.	.	.	.	.	T	T	T								T	T			.	.	.	.
Template Predicted Secondary structure																.	.																				.	.	.	.	.	.	.	.	.	.															.	.	.	.
Template SS confidence
		334	.	.	.	.	.	340	.	.	.	.	.	.	.			.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.											.	.	.	370	.	.	.	.	.	.	.	.	.	380					.	.	.	.	.	.	.	.	.	390	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions