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Job DescriptionP0A825
Confidence99.97%DateThu Jan 5 11:06:42 GMT 2012
Rank70Aligned Residues369
% Identity15%Templatec3pplB_
PDB info PDB header:transferaseChain: B: PDB Molecule:aspartate aminotransferase; PDBTitle: crystal structure of an aspartate transaminase (ncgl0237, cgl0240)2 from corynebacterium glutamicum atcc 13032 kitasato at 1.25 a3 resolution
Resolution1.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20..... ....30.........40.........50.. .......60.........70.....
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Query Sequence  MNIADYDAELWQAMEQEKVR. . . . . QEEHIELIASENYTSPRVMQAQGSQLT. . . . . NKYAEGYPGKRYYGGCEYVDIVE
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Template Sequence  VSLQDFDAERIGLFHEDIKRKFDELKSKNLKLDLTRGKPSSEQLDFADELLALPGKGDFKAADGTDVRNYGGLDGIVD. .
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   4.....10.........20.........30.........40.........50.........60.........70.........80.
 
   76...80.........90........ .100........ .110.........120.........130.........140
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Query Sequence  QLAIDRAKELFGADYANVQPHSG. SQANFAVYTA. . . . . . . . . . . . . . LLEPGDTVLGMNLAHGGHLTHGSPVNFSGKLY
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Template Sequence  . . IRQIWADLLGVPVEQVLAGDASSLNIXFDVISWSYIFGNNDSVQPWSKEETVKWICPVPGYDRHFS. . . ITERFGFEX
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   82.......90.........100.........110.........120.........130.........140....... ..150......
 
   141........150.........160.........170.... .....180.........190. ........200.........210...
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Query Sequence  NIVPYGIDATGHIDYADLEKQAKEHKPKMIIGGF. . . SAYSGVVDWAKMREIAD. . . . SIGAYLFVDMAHVAGLVAAGVY
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Template Sequence  ISVPXNEDG. . . PDXDAVEELVKNPQVKGXWVVPVFSNPTGFTVTEDVAKRLSAXETAAPDFRVVWDNAYAVHTLTDEFP
Template Known Secondary structure  TT...
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   157..160..... ....170.........180.........190.........200.........210.........220.........230...
 
   214. ....220.........230. ........240.........250.........260.........270.. .......280
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Query Sequence  PN. . . . . . . . . . PVPHAHVVTTTTHKTL. AGPRGGLILAKGGSEELYKKLNSAVFPGGQGGPLMHVIAGK. . AVALKEAM
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Template Sequence  EVIDIVGLGEAAGNPNRFWAFTSTSKITLAGAGVSFFLTSAENRKWYTGHAGIRGIGPNKVNQLAHARYFGDAEGVRAVX
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TT
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   234.....240.........250.........260.........270.........280.........290.........300.........310...
 
   281........290.........300.........310.........320.........330.........340.........350.........360
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Query Sequence  EPEFKTYQQQVAKNAKAMVEVFLERGYKVVSGGTDNHLFLVDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTS
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Template Sequence  RKHAASLAPKFNKVLEILDSRLAEYGVAQWTVPAGGYFISLDVVP. . GTASRVAELAKEAGIALTGAGSSYPLRQDPENK
Template Known Secondary structure  GGGT




SBSS

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   314.....320.........330.........340.........350........ .360.........370.........380.........390.
 
   361........370.........380.........390.
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Query Sequence  GIRVGTPAITRRGFKEAEAKELAGWMCDVLD
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Template Sequence  NLRLAPSLPP. . . . . VEELEVAXDGVATCVL
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   392.......400. ........410.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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