Job Description P0A825 Confidence 99.96% Date Thu Jan 5 11:06:42 GMT 2012 Rank 106 Aligned Residues 342 % Identity 15% Template c3pdxA_ PDB info PDB header:transferase Chain: A: PDB Molecule:tyrosine aminotransferase; PDBTitle: crystal structural of mouse tyrosine aminotransferase Resolution 2.91 Å

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		27	.	.	30	.	.	.	.	.	.	.							.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.						.	.	90	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.																																																			.	.	.	.	.
Query SS confidence													.	.	.	.	.	.																																																			.	.	.	.	.
Query Sequence		E	E	H	I	E	L	I	A	S	E	N	.	.	.	.	.	.	Y	T	S	P	R	V	M	Q	A	Q	G	S	Q	L	T	N	K	Y	A	E	G	Y	P	G	K	R	Y	Y	G	G	C	E	Y	V	D	I	V	E	Q	L	A	I	D	R	A	K	E	L	F	G	.	.	.	.	.	A	D	Y	A	N	V	Q	P
Query Conservation													.	.	.	.	.	.																																																			.	.	.	.	.
Alig confidence													.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.												.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.	.	.	.
Template Sequence		K	T	V	I	S	L	S	I	G	D	P	T	V	F	G	N	L	P	T	D	P	E	V	T	Q	A	M	K	D	A	L	D	S	G	K	Y	N	G	Y	A	P	S	I	G	Y	L	.	.	.	.	.	.	.	.	.	.	S	S	R	E	E	V	A	S	Y	Y	H	C	P	E	A	P	L	E	A	K	D	V	I	L
Template Known Secondary structure		S						S				T	T	S	S	S	S	S																T	T		S	S	S				T	T				.	.	.	.	.	.	.	.	.	.										T			S	S	S				G	G	G
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.											.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		96	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		H	S	G	.	S	Q	A	N	F	A	V	Y	T	A	L	L	E	P	G	D	T	V	L	G	M	N	L	A	H	G	G	H	L	T	H	G	S	P	V	N	F	S	G	K	L	Y	N	I	V	P	Y	G	I	D	A	T	G	H	I	D	Y	A	D	L	E	K	Q	A	K	E	H	K	P	K	M	I	I	G	G	F
Query Conservation					.
Alig confidence					.																											.	.	.
Template Conservation																																.	.	.
Template Sequence		T	S	G	C	S	Q	A	I	E	L	C	L	A	V	L	A	N	P	G	Q	N	I	L	I	P	R	P	G	F	S	.	.	.	L	Y	R	T	L	A	E	S	M	G	I	E	V	K	L	Y	N	L	L	P	E	K	S	W	E	I	D	L	K	Q	L	E	S	L	I	D	E	K	T	A	C	L	V	V	N	N	P
Template Known Secondary structure			S	S											T	T			S	S							S	S				.	.	.										T										G	G	G	T	T									T	T			S	S								S	S
Template Predicted Secondary structure																																.	.	.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170				.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		175	.					.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.				.	220	.	.	.	.	.	.	.	.	.	230	.			.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure				.	.	.	.																																											.	.	.														.	.
Query SS confidence				.	.	.	.																																											.	.	.														.	.
Query Sequence		S	A	.	.	.	.	Y	S	G	V	V	D	W	A	K	M	R	E	I	A	D	S	I	G	A	Y	L	F	V	D	M	A	H	V	A	G	L	V	A	A	G	V	Y	P	N	P	V	P	.	.	.	H	A	H	V	V	T	T	T	T	H	K	T	L	.	.	A	G	P	R	G	G	L	I	L	A	K	G	G	S
Query Conservation				.	.	.	.																																											.	.	.														.	.
Alig confidence				.	.	.	.																																											.	.	.														.	.
Template Conservation
Template Sequence		S	N	P	C	G	S	V	F	S	K	R	H	L	Q	K	I	L	A	V	A	E	R	Q	C	V	P	I	L	A	D	E	I	Y	G	D	M	V	F	S	D	C	K	Y	E	P	M	A	T	L	S	T	N	V	P	I	L	S	C	G	G	L	A	R	W	L	V	P	G	W	R	L	G	W	I	L	I	H	D	R	R
Template Known Secondary structure			T	T	T																	T	T	T	T								T	T	T	T		B		S	S	S					G	G	G	G		S	S								B					S		G	G	G										S	S
Template Predicted Secondary structure
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
		246	.	.	.	250	.	.	.	.	.	.	.	.			.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure															.	.
Query SS confidence															.	.
Query Sequence		E	E	L	Y	K	K	L	N	S	A	V	F	P	.	.	G	G	Q	G	G	P	L	M	H	V	I	A	G	K	A	V	A	L	K	E	A	M	E	P	E	F	K	T	Y	Q	Q	Q	V	A	K	N	A	K	A	M	V	E	V	F	L	E	R	G	Y	K	V	V	S	G	G	T	D	N	H	L	F	L	V	D	L
Query Conservation															.	.
Alig confidence															.	.
Template Conservation
Template Sequence		D	I	F	G	N	E	I	R	D	G	L	V	K	L	S	Q	R	I	L	G	P	C	T	I	V	Q	G	A	L	K	S	I	L	Q	R	T	P	Q	E	F	Y	Q	D	T	L	S	F	L	K	S	N	A	D	L	C	Y	G	A	L	S	A	I	P	G	L	Q	P	V	R	P	S	G	A	M	Y	L	M	V	G	I
Template Known Secondary structure		S	S	S													T	T	T			S																																									S	T	T	B			B				B	T	T						B
Template Predicted Secondary structure
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
		324	.	.	.	.	.						330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure								.	.	.	.	.
Query SS confidence								.	.	.	.	.
Query Sequence		V	D	K	N	L	T	.	.	.	.	.	G	K	E	A	D	A	A	L	G	R	A	N	I	T	V	N	K	N	S	V	P	N	D	P	K	S	P	F	V	T	S	G	I	R	V	G	T	P	A	I	T	R	R	G	F	K	E	A	E	A	K	E	L	A	G	W	M	C	D	V	L	D	S	I
Query Conservation								.	.	.	.	.
Alig confidence								.	.	.	.	.																									.	.	.	.	.	.								.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.								.	.	.	.	.	.
Template Sequence		E	M	E	H	F	P	E	F	E	N	D	V	E	F	T	E	R	L	I	A	E	Q	S	V	H	C	L	P	A	T	C	F	E	Y	P	.	.	.	.	.	.	N	F	F	R	V	V	I	.	.	.	.	.	.	T	V	P	E	V	M	M	L	E	A	C	S	R	I	Q	E	F	C	E	Q	H
Template Known Secondary structure			T	T	S			S		S	S																			G	G	G	G	T			.	.	.	.	.	.	S						S	.	.	.	.	.	.		S																	T	T	T
Template Predicted Secondary structure																																					.	.	.	.	.	.								.	.	.	.	.	.
Template SS confidence
		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.							.	.	.	.	.	.	420							.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions