 |
Job Description | P0A825 | Confidence | 20.83% | Date | Thu Jan 5 11:06:42 GMT 2012 |
Rank | 483 | Aligned Residues | 99 |
% Identity | 12% | Template | c3obiC_ |
PDB info |
PDB header:hydrolase | Chain: C: PDB Molecule:formyltetrahydrofolate deformylase; |
PDBTitle: crystal structure of a formyltetrahydrofolate deformylase (np_949368)2 from rhodopseudomonas palustris cga009 at 1.95 a resolution
|
Resolution | 1.95 Å |
|
 |
  |   |
71 | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | |
|
|
. | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | D | I | V | E | Q | L | A | I | D | R | A | K | E | L | . |
. |
. |
. |
. |
. |
. |
. |
F | G | A | D | Y | A | N | V | Q | P | H | S | G | S | Q | A | N | F | A | V | Y | T | A | L | L | E | P | G | D | . |
. |
. |
T | V | L | G | M | N | L | A | H | G | G | H | L | T | H | G | S | P | V | N | F | S | G | K | L |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |
|   |
| . | . | . | . | . | . | . | . |   |
|   |   |   |   |   |
|   |   |   |
|
|
|   |
|   |   |   |   |
|   |
|
|   |   |
|
|
| . | . | . |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|   |
|   |   |
|   |
|
|
|   |   |   |   |   |
|   |
|   |   |
|
|   |   |
|
|
|
|   |   |   |   |   |   |
| . | . |   |
|   |   |   |   |
|
|
Template Sequence |   |
L | A | S | L | R | T | G | F | G | V | I | A | A | K | F | T | X | G | W | H | X | R | D | R | E | T | R | R | K | V | X | L | L | V | S | Q | S | D | H | C | L | A | D | I | L | Y | R | W | R | V | G | D | L | H | X | I | P | T | A | I | V | S | N | H | P | R | E | T | F | S | . |
. |
G | F | D | F | G | D | I | P |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |  |  | T | T | S |
|  |  |  |  |  |  |  | S | S |
|
|  |  |  |  |  |  |  |  |  |  |  | T | T | S | S |
|  |  |  |  |  |  |  |  | S | S |
| G | G | G |
|
| . | . | S |
|
|
| T | T | S |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  | . | . |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
62 | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | |
|
. | . | . | . | . | . | . | . |
  |
  |   |
140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | N | I | V | P | Y | G | I | D | A | T | G | H | I | D | Y | A | D | L | E | K | Q | A | K | E | H | K | P | K | M | I | I | G |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   | . |   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |
|
|
|
|
|
Template Sequence |   |
F | Y | H | F | P | V | N | . |
K | D | T | R | R | Q | Q | E | A | A | I | T | A | L | I | A | Q | T | H | T | D | L | V | V | L |
Template Known Secondary structure |   |
 |  |  |
|
|
|
| . | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
| . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
140 | . | . | . | . | . | . | |
. | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|