Return to main results Retrieve Phyre Job Id

Job DescriptionP0A825
Confidence99.82%DateThu Jan 5 11:06:42 GMT 2012
Rank233Aligned Residues336
% Identity14%Templatec3n5mD_
PDB info PDB header:transferaseChain: D: PDB Molecule:adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PDBTitle: crystals structure of a bacillus anthracis aminotransferase
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   40.........50.........60.........70.........80.........90.........100.........110..
Predicted Secondary structure 























.......
Query SS confidence 








































































. . . . . . .
Query Sequence  SPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGADYANVQPHSGSQANFAVYTALLEP. . . . . . .
Query Conservation 

 
  
        
           
               
 
 
     
   


 
    
 

  
.......
Alig confidence 











.........



















































.......
Template Conservation   
 
  
     .........                 

  
         
 
  




 
 





  
   
  
Template Sequence  RKELAEAAYKQL. . . . . . . . . QTLSYFPXSQSHEPAIKLAEKLNEWLGGEYVIFFSNSGSEANETAFKIARQYYAQKGEP
Template Known Secondary structure 
.........TT
S


TTS

TS
SSTTT
T
Template Predicted Secondary structure 
.........





















Template SS confidence 















































































   64.....70..... ....80.........90.........100.........110.........120.........130....
 
   113......120.........130...... ...140...... ...150.........160........
Predicted Secondary structure  .












..........



.............













Query SS confidence  .























. . . . . . . . . .









. . . . . . . . . . . . .





















Query Sequence  . GDTVLGMNLAHGGHLTHGSPVNFS. . . . . . . . . . GKLYNIVPYG. . . . . . . . . . . . . IDATGHIDYADLEKQAKEHKPK
Query Conservation  .

 
           
        ..........
         .............       
 
 
          
Alig confidence  .























..........









.............





















Template Conservation   
  

     


 
                                                              

Template Sequence  HRYKFXSRYRGYHGNTXATXAATGQAQRRYQYEPFASGFLHVTPPDCYRXPGIERENIYDVECVKEVDRVXTWELSETIA
Template Known Secondary structure  T

TT



SSS


GGGTTTT



S




TTTSTTTTTS
GGG

GGG
Template Predicted Secondary structure 














































Template SS confidence 















































































   135....140.........150.........160.........170.........180.........190.........200.........210....
 
   169170.... .....180.. .......190.........200.... .....210........ .220.........230.........240
Predicted Secondary structure 

..







....



.













.














Query SS confidence 





. .







. . . .





















.













.





















Query Sequence  MIIGGF. . SAYSGVVD. . . . WAKMREIADSIGAYLFVDMAHV. AGLVAAGVYPNPVP. HAHVVTTTTHKTLAGPRGGLIL
Query Conservation 

    ..
  
   
....
  
  

   
  



 
  . 
            .  
    
  
 
 
  

 
 
Alig confidence 





..







....





















.













.





















Template Conservation 


 


    
       

  
  

   
 


 


 

 



   
    

 


   

 
  
  
  

 
Template Sequence  AFIXEPIITGGGILXAPQDYXKAVHETCQKHGALLISDEVICGFGRTGKAFGFXNYDVKPDIITXAKGITSAYLPLSATA
Template Known Secondary structure 
SSBTTTT
B


TTT

TTTTTTTTSSSSGGGGTT


S
GGGGTTSS

Template Predicted Secondary structure 













































Template SS confidence 















































































   215....220.........230.........240.........250.........260.........270.........280.........290....
 
   241........250.. .......260.........270.........280.........290.........300.........310.......
Predicted Secondary structure 


...
























Query SS confidence 











. . .
































































Query Sequence  AKGGSEELYKKL. . . NSAVFPGGQGGPLMHVIAGKAVALKEAMEPEFKTYQQQVAKNAKAMVEVFLERGYKVVSGGTDNH
Query Conservation              ...                 

                          
   
   
  
        
Alig confidence 











...





























































.

Template Conservation      
                 
    
   


 
 
                  
   
  
      
  


 .
 
Template Sequence  VKREIYEAFKGKGEYEFFRHINTFGGNPAACALALKNLEIIENENLIERSAQXGSLLLEQLKEEIGEHPLVGDIRGK. GL
Template Known Secondary structure  GGG
SSSTT
S




SSSS
TTTTSTTS.SS
Template Predicted Secondary structure 






















.

Template SS confidence 















































































   295....300.........310.........320.........330.........340.........350.........360.........370. ..
 
   318.320......... 330.........340.........350.........360.........370.........380.........
Predicted Secondary structure 





........























Query SS confidence 











. . . . . . . .



























































Query Sequence  LFLVDLVDKNLT. . . . . . . . GKEADAALGRANITVNKNSVPNDPKSPFVTSGIRVGTPAITRRGFKEAEAKELAGWMCDV
Query Conservation              ........       
   

 
     
           


     
  
    

   
  
   
Alig confidence 











........



























....









....













Template Conservation     
                       
   

     
         ....

  
 
  
....   

     
  
Template Sequence  LVGIELVNDKETKEPIDNDKIASVVNACKEKGLIIGRNGXTTAGYNNI. . . . LTLAPPLVIS. . . . SEEIAFVIGTLKTA
Template Known Secondary structure 
TTTT

TT

TTSSTT


....


TT

....
Template Predicted Secondary structure 






















....





....
Template SS confidence 















































































   374.....380.........390.........400.........410.........420. ........430. ........440.....
 
   390...
Predicted Secondary structure 
Query SS confidence 



Query Sequence  LDSI
Query Conservation 
   
Alig confidence 



Template Conservation     
Template Sequence  XERI
Template Known Secondary structure  TT
Template Predicted Secondary structure 

Template SS confidence 



   446...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions