Job Description P0A825 Confidence 99.94% Date Thu Jan 5 11:06:42 GMT 2012 Rank 180 Aligned Residues 338 % Identity 11% Template c3m5uA_ PDB info PDB header:transferase Chain: A: PDB Molecule:phosphoserine aminotransferase; PDBTitle: crystal structure of phosphoserine aminotransferase from2 campylobacter jejuni Resolution 2.15 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.			.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure																																																																			.	.
Query SS confidence																																																																			.	.
Query Sequence		E	H	I	E	L	I	A	S	E	N	Y	T	S	P	R	V	M	Q	A	Q	G	S	Q	L	T	N	K	Y	A	E	G	Y	P	G	K	R	Y	Y	G	G	C	E	Y	V	D	I	V	E	Q	L	A	I	D	R	A	K	E	L	F	G	A	D	Y	A	N	.	.	V	Q	P	H	S	G	S	Q	A	N	F	A	V
Query Conservation																																																																			.	.
Alig confidence																																																																			.	.
Template Conservation
Template Sequence		R	K	I	N	F	S	A	G	P	S	T	L	P	L	E	I	L	E	Q	A	Q	K	E	L	C	D	Y	Q	G	R	G	Y	S	I	X	E	I	S	H	R	T	K	V	F	E	E	V	H	F	G	A	Q	E	K	A	K	K	L	Y	E	L	N	D	D	Y	E	V	L	F	L	Q	G	G	A	S	L	Q	F	A	X
Template Known Secondary structure								S	S	S														T	S	S	S	G	G	G	S	S	S		G	G	G	S		S	S	S																			T			T	T							S	S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure																																																																		.
Query SS confidence																																																																		.
Query Sequence		Y	T	A	L	L	E	P	G	D	T	V	L	G	M	N	L	A	H	G	G	H	L	T	H	G	S	P	V	N	F	S	G	K	L	Y	N	I	V	P	Y	G	I	D	A	T	G	H	I	D	Y	A	D	L	E	K	Q	A	K	E	H	K	P	K	M	.	I	I	G	G	F	S	A	Y	S	G	V	V	D	W	A
Query Conservation																																																																		.
Alig confidence																								.																													.	.	.											.
Template Conservation																								.																													.	.	.
Template Sequence		I	P	X	N	L	A	L	N	G	V	C	E	Y	A	N	T	G	V	W	T	K	K	.	A	I	K	E	A	Q	I	L	G	V	N	V	K	T	V	A	S	S	E	E	S	N	F	D	H	I	P	R	.	.	.	V	E	F	S	D	N	A	D	Y	A	Y	I	C	S	N	N	T	I	Y	G	T	Q	Y	Q	N	Y
Template Known Secondary structure									S	S								S						.								T	T										T	T	T	T	S		S				.	.	.					T	T	S	S						S			T	T	T	T				S	S
Template Predicted Secondary structure																								.																													.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.				.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																												.	.	.	.	.	.
Query SS confidence																																																																												.	.	.	.	.	.
Query Sequence		K	M	R	E	I	A	D	S	I	G	A	Y	L	F	V	D	M	A	H	V	A	G	L	V	A	A	G	V	Y	P	N	P	V	P	H	A	H	V	V	T	T	T	T	H	K	T	L	A	G	P	R	G	G	L	I	L	A	K	G	G	S	E	E	L	Y	K	K	L	N	S	A	V	F	P	.	.	.	.	.	.
Query Conservation																																																																												.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.																.	.	.	.	.																																																.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.																.	.	.	.	.
Template Sequence		P	.	.	.	.	.	.	K	T	K	T	P	L	I	V	D	A	S	S	D	F	F	.	.	.	.	.	S	R	K	V	D	F	S	N	I	A	L	F	Y	G	G	V	Q	K	N	A	G	I	S	G	L	S	C	I	F	I	R	K	D	X	L	E	R	S	K	N	K	Q	I	P	S	X	L	N	Y	L	T	H	A
Template Known Secondary structure			.	.	.	.	.	.			S	S							G	G	G	T	T	.	.	.	.	.	S	S					T	T								T	T	T	T	S	S		T	T																T					G	G	G
Template Predicted Secondary structure			.	.	.	.	.	.																.	.	.	.	.
Template SS confidence
		158							.	160	.	.	.	.	.	.	.	.	.	170	.	.	.						.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
					259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.		.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.		.	.	.	.	310	.	.	.	.	.	.	.				.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure		.	.	.																									.																								.													.	.	.
Query SS confidence		.	.	.																									.																								.													.	.	.
Query Sequence		.	.	.	G	G	Q	G	G	P	L	M	H	V	I	A	G	K	A	V	A	L	K	E	A	M	E	P	.	E	F	K	T	Y	Q	Q	Q	V	A	K	N	A	K	A	M	V	E	V	F	L	E	R	.	G	Y	K	V	V	S	G	G	T	D	N	H	.	.	.	L	F	L	V	D	L	V	D	K	N	L	T	G
Query Conservation		.	.	.																									.																								.													.	.	.
Alig confidence		.	.	.																									.																								.													.	.	.
Template Conservation
Template Sequence		E	N	Q	S	L	F	N	T	P	P	T	F	A	I	Y	X	F	N	L	E	X	D	W	L	L	N	Q	G	G	L	D	K	V	H	E	K	N	S	Q	K	A	T	X	L	Y	E	C	I	D	L	S	N	G	F	Y	K	G	H	A	D	K	K	D	R	S	L	X	N	V	S	F	N	I	A	K	N	K	D	L	E
Template Known Secondary structure			T	T	T		S	S																			T	T	T																						T	S	T	T	S				S	S		G	G	G	B		S	S							S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	A	D	A	A	L	G	R	A	N	I	T	V	N	K	N	S	V	P	N	D	P	K	S	P	F	V	T	S	G	I	R	V	G	T	P	A	I	T	R	R	G	F	K	E	A	E	A	K	E	L	A	G	W	M	C	D	V	L	D	S
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.											.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.											.	.	.	.
Template Sequence		P	L	F	V	K	E	A	E	E	A	G	X	I	G	L	K	G	H	R	I	L	G	G	.	.	.	.	.	.	.	.	I	R	A	S	I	Y	N	A	L	N	.	.	.	.	L	D	Q	V	K	T	L	C	E	F	X	K	E	F	Q	G	K
Template Known Secondary structure											T	T					B			T	T	T		S	.	.	.	.	.	.	.	.							T	T	S		.	.	.	.
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.											.	.	.	.
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.									330	.	.	.	.	.	.	.	.	.					340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions