Job Description P0A825 Confidence 99.97% Date Thu Jan 5 11:06:42 GMT 2012 Rank 83 Aligned Residues 359 % Identity 12% Template c3jtxB_ PDB info PDB header:transferase Chain: B: PDB Molecule:aminotransferase; PDBTitle: crystal structure of aminotransferase (np_283882.1) from neisseria2 meningitidis z2491 at 1.91 a resolution Resolution 1.91 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.			.	.	.	.	30	.	.	.	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																						.	.													.	.
Query SS confidence																						.	.													.	.
Query Sequence		M	N	I	A	D	Y	D	A	E	L	W	Q	A	M	E	Q	E	K	V	R	.	.	Q	E	E	H	I	E	L	I	A	S	E	N	.	.	Y	T	S	P	R	V	M	Q	A	Q	G	S	Q	L	T	N	K	Y	A	E	G	Y	P	G	K	R	Y	Y	G	G	C	E	Y	V	D	I	V	E	Q	L	A	I	D	R
Query Conservation																						.	.													.	.
Alig confidence																						.	.													.	.																				.	.	.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.	.
Template Sequence		K	Q	L	K	P	Y	P	F	A	R	L	H	E	A	X	Q	G	I	S	A	P	E	G	X	E	A	V	P	L	H	I	G	E	P	K	H	P	T	P	K	V	I	T	D	A	L	T	A	S	L	H	E	L	E	K	.	.	.	.	.	.	.	.	Y	P	L	T	A	G	L	P	E	L	R	Q	A	C	A	N	W
Template Known Secondary structure		T	T														T	T					T	T						T	T			S			S													T	G	G	G	G	G	S	.	.	.	.	.	.	.	.				T	T
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60									.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		82	.	.	.	.	.						.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.				.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure								.	.	.	.	.																									.	.	.
Query SS confidence								.	.	.	.	.																									.	.	.
Query Sequence		A	K	E	L	F	G	.	.	.	.	.	A	D	Y	A	N	V	Q	P	H	S	G	S	Q	A	N	F	A	V	Y	T	A	L	L	E	.	.	.	P	G	D	T	V	L	G	M	N	L	A	H	G	G	H	L	T	H	G	S	P	V	N	F	S	G	K	L	Y	N	I	V	P	Y	G	I	D	A	T	G	H	I
Query Conservation								.	.	.	.	.																									.	.	.
Alig confidence								.	.	.	.	.																									.	.	.														.	.	.																				.
Template Conservation																																																					.	.	.																				.
Template Sequence		L	K	R	R	Y	D	G	L	T	V	D	A	D	N	E	I	L	P	V	L	G	S	R	E	A	L	F	S	F	V	Q	T	V	L	N	P	V	G	I	K	P	A	I	V	S	P	N	P	F	Y	Q	.	.	.	I	Y	E	G	A	T	L	L	G	G	G	E	I	H	F	A	N	C	P	.	A	P	S	F	N	P
Template Known Secondary structure						T	T	T					T	T	T	S					S	S																											S				.	.	.									T	T										.	T	T	T
Template Predicted Secondary structure																																																					.	.	.																				.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.				.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.		.	.	150	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.		.	.	.	.	.	180	.	.				.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.										.	.	.	.	220
Predicted Secondary structure																							.									.	.	.																																		.	.	.	.	.	.	.	.	.
Query SS confidence																							.									.	.	.																																		.	.	.	.	.	.	.	.	.
Query Sequence		D	Y	A	D	L	E	K	Q	A	K	E	H	K	P	K	M	I	I	G	G	F	.	S	A	Y	S	G	V	V	D	.	.	.	W	A	K	M	R	E	I	A	D	S	I	G	A	Y	L	F	V	D	M	A	H	V	A	G	L	V	A	A	G	V	Y	P	N	.	.	.	.	.	.	.	.	.	P	V	P	H	A
Query Conservation																							.									.	.	.																																		.	.	.	.	.	.	.	.	.
Alig confidence																							.									.	.	.																																		.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	W	R	S	I	S	E	E	V	W	K	R	T	K	L	V	F	V	C	S	P	N	N	P	S	G	S	V	L	D	L	D	G	W	K	E	V	F	D	L	Q	D	K	Y	G	F	I	I	A	S	D	E	C	Y	S	E	I	Y	F	D	G	N	K	P	L	G	C	L	Q	A	A	A	Q	L	G	R	S	R	Q	K
Template Known Secondary structure			G	G	G	S						T	T								S	S		T	T	T																												T	T	T	T			S	T	T													T	T				T	T
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		221	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		H	V	V	T	T	T	T	H	K	T	L	.	A	G	P	R	G	G	L	I	L	A	K	G	G	S	E	E	L	Y	K	K	L	N	S	A	V	F	P	G	G	Q	G	G	P	L	M	H	V	I	A	G	K	A	V	A	L	K	E	A	M	E	P	E	F	K	T	Y	Q	Q	Q	V	A	K	N	A	K	A	M	V
Query Conservation													.
Alig confidence													.																																.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.
Template Sequence		L	L	X	F	T	S	L	S	R	S	N	V	P	G	L	R	S	G	F	V	A	G	D	A	E	L	L	K	N	F	L	L	Y	R	T	Y	H	G	S	A	X	S	I	.	.	.	.	.	.	P	V	Q	R	A	S	I	A	A	W	D	D	E	Q	H	V	I	D	N	R	R	L	Y	Q	E	K	F	E	R	V	I
Template Known Secondary structure												S		G	G	G																							T						.	.	.	.	.	.
Template Predicted Secondary structure																																													.	.	.	.	.	.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.							.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.			.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.
Query SS confidence																																																									.	.
Query Sequence		E	V	F	L	E	R	G	Y	K	V	V	S	G	G	T	D	N	H	L	F	L	V	D	L	V	D	K	N	L	T	G	K	E	A	D	A	A	L	G	R	A	N	I	T	V	N	K	N	S	V	P	N	D	P	K	.	.	S	P	F	V	T	S	G	I	R	V	G	T	P	A	I	T	R	R	G	F	K	E	A
Query Conservation																																																									.	.
Alig confidence																.	.									.																															.	.													.	.	.	.	.	.
Template Conservation																.	.									.																																													.	.	.	.	.	.
Template Sequence		P	I	L	Q	Q	V	F	D	V	K	L	P	D	A	.	.	S	F	Y	I	W	L	K	V	.	P	D	G	D	D	L	A	F	A	R	N	L	W	Q	K	A	A	I	Q	V	L	P	G	R	F	L	A	R	D	T	E	Q	G	N	P	G	E	G	Y	V	R	I	A	L	.	.	.	.	.	.	V	A	D	V	A
Template Known Secondary structure					T	T	T	S						S	S	.	.	S	S							.	T	T	S																				G	G	G	G	S			B	T	T	B		T	T	T	T							.	.	.	.	.	.		S
Template Predicted Secondary structure																.	.									.																																													.	.	.	.	.	.
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.			.	.	.	.	.	330	.	.		.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.							.	.	.	380	.
		378	.	380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	K	E	L	A	G	W	M	C	D	V	L	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	C	V	K	A	A	E	D	I	V	S	L	Y	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		382	.	.	.	.	.	.	.	390	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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