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Job DescriptionP0A825
Confidence99.97%DateThu Jan 5 11:06:42 GMT 2012
Rank88Aligned Residues377
% Identity14%Templatec3if2B_
PDB info PDB header:transferaseChain: B: PDB Molecule:aminotransferase; PDBTitle: crystal structure of putative amino-acid aminotransferase2 (yp_265399.1) from psychrobacter arcticum 273-4 at 2.50 a resolution
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   14.....20.........30.........40.........50.........60.... .....70.........80....
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Query Sequence  ELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRY. . . . . . . . . YGGCEYVDIVEQLAIDRAKE
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Template Sequence  QLXDDLGDALKSDQPVNXLGGGNPAKIDAVNELFLETYKALGNDNDTGKANSSAIISXANYSNPQGDSAFIDALVGFFNR
Template Known Secondary structure  TSSS


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   18.20.........30.........40.........50.........60.........70.........80.........90.......
 
   85.... 90........ .100.........110.. .......120......... 130.........140.........150
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Query Sequence  LFGAD. . YANVQPHSG. SQANFAVYTALLEP. . . . . . . . GDTVLGMNLAHGGHLTH. . . GSPVNFSGKLYNIVPYGIDAT
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Template Sequence  HYDWNLTSENIALTNGSQNAFFYLFNLFGGAFVNEKSVDKSILLPLTPEYIGYSDVHVEGQHFAAVLPHIDEVTHDGEEG
Template Known Secondary structure 




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GGGTT

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   98.100.........110.........120.........130.........140.........150.........160.........170.......
 
   151........160... ......170.... .....180.. .......190.........200.........210.........220
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Query Sequence  . . . GHIDYADLEKQAK. . . EHKPKMIIGGF. SAYSGVVD. . . WAKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPVPHA
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Template Sequence  FFKYRVDFEALENLPALKEGRIGAICCSRPTNPTGNVLTDEEXAHLAEIAKRYDIPLIIDNAYGXPFPNIIYSDAHLNWD
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   185....190.........200.........210.........220.........230.........240.........250.........260....
 
   221 ........230. ........240.........250.........260.........270..... ....280.........290.....
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Query Sequence  H. . VVTTTTHKTL. AGPRGGLILAKGGSEELYKKLNSAVFPGGQGGPLMHVIAGKAVA. . LKEAMEPEFKTYQQQVAKNA
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Template Sequence  NNTILCFSLSKIGLPGXRTGIIVADAKVIEAVSAXNAVVNLAPTRFGAAIATPLVANDRIKQLSDNEIKPFYQKQATLAV
Template Known Secondary structure  TTSGGGT
GGG



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   265....270.........280.........290.........300.........310.........320.........330.........340....
 
   296...300.........310.........320.........330.........340.........350...... ...360.........370.
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Query Sequence  KAMVEVFLERGYKVVSGGTDNHLFLVDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSP. . . . FVTSGIRVGTPAITR
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Template Sequence  KLLKQALGDYPLXIHKPEG. AIFLWLWFKDLPISTLDLYERLKAKGTLIVPSEYFFPGVDVSDYQHAHECIRXSIAA. . .
Template Known Secondary structure  SSSSS


B.SSTT
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   345....350.........360... ......370.........380.........390.........400.........410.........420
 
   372.......380.........390.......
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Query Sequence  RGFKEAEAKELAGWMCDVLDSINDEA
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Template Sequence  . . . DEQTLIDGIKVIGEVVRELYDNK
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   421........430.........440...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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