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Job DescriptionP0A825
Confidence99.85%DateThu Jan 5 11:06:42 GMT 2012
Rank228Aligned Residues342
% Identity11%Templatec3i5tB_
PDB info PDB header:transferaseChain: B: PDB Molecule:aminotransferase; PDBTitle: crystal structure of aminotransferase prk07036 from rhodobacter2 sphaeroides kd131
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  QEEHIELIAS. . ENYT. . . SPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELF. . GADYANVQPHSG
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Template Sequence  GRRLIDGPAGMWCAQVGYGRREIVDAMAHQA. . . . MVLPYASPWYMATSPAAR. . . . LAEKIATLTPGDLNRI. FFTTGG
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TTT
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   50.........60.........70.........80 .........90........ .100.........110.... .....120
 
   99100.........110.. .......120.........130......... 140.........150.
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Query Sequence  SQANFAVYTALLEP. . . . . . . . GDTVLGMNLAHGGHLTHGSPVNFSGKL. . . . . . . . . . . . YNIVPYGIDATG. . . . . . .
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Template Sequence  STAVDSALRFSEFYNNVLGRPQKKRIIVRYDGYHG. . STALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEA
Template Known Secondary structure  TT
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   121........130.........140.........150..... ....160.........170.........180.........190........
 
   152.......160.........170.... .....180.. .......190.........200.........210... ....
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Query Sequence  . . . . . HIDYADLEKQAKEHKPKMIIGGF. . SAYSGVVD. . . . WAKMREIADSIGAYLFVDMAHVAGLVAAGVY. . . PNPV
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Template Sequence  FLDDLVQEFEDRIESLGPDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGEWFASEKVFG
Template Known Secondary structure 
GGG
SSBTTTTSB


TTTT

TTTTTTTTSSS
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   199200.........210.........220.........230.........240.........250.........260.........270........
 
   218.220.........230.........240.........250.........260.........270.........280.........290.......
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Query Sequence  PHAHVVTTTTHKTLAGPRGGLILAKGGSEELYKKLNSAVFPGGQGGPLMHVIAGKAVALKEAMEPEFKTYQQQVAKNAKA
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Template Sequence  VVPDIITFAKGVTSGYVPLGGLAISEAVLARISGENAKGSWFTNGYTYSNQPVACAAALANIELMEREGIVDQAREMADY
Template Known Secondary structure 


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   279280.........290.........300.........310.........320.........330.........340.........350........
 
   298.300..... ....310.........320......... 330.........340.........350.........360.........370.
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Query Sequence  MVEVFLER. . GYKVVSGGTDNHLFLVDLVDKNLT. . . . GKEADAALGRANITVNKNSVPNDPKSPFVTSGIRVGTPAITR
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Template Sequence  FAAALASLRDLPGVAETRSVGLVGCVQCLLGTAEDKAFTLKIDERCFELGLIVRPLG. . . . . . . . . . . DLCVISPPLIIS
Template Known Secondary structure  TTTTSTTTT



TT
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   359360.........370.........380.........390.........400.........410..... ....420.......
 
   372.......380.........390...
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Query Sequence  RGFKEAEAKELAGWMCDVLDSI
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Template Sequence  . . . . RAQIDEMVAIMRQAITEV
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   434.....440.........450.
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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