Job Description P0A825 Confidence 99.92% Date Thu Jan 5 11:06:42 GMT 2012 Rank 200 Aligned Residues 334 % Identity 14% Template c3i4jC_ PDB info PDB header:transferase Chain: C: PDB Molecule:aminotransferase, class iii; PDBTitle: crystal structure of aminotransferase, class iii from2 deinococcus radiodurans Resolution 1.70 Å

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		26	.	.	.	30	.	.	.	.	.			.	.	.	.				40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.
Predicted Secondary structure												.	.					.	.	.																																																										.
Query SS confidence												.	.					.	.	.																																																										.
Query Sequence		Q	E	E	H	I	E	L	I	A	S	.	.	E	N	Y	T	.	.	.	S	P	R	V	M	Q	A	Q	G	S	Q	L	T	N	K	Y	A	E	G	Y	P	G	K	R	Y	Y	G	G	C	E	Y	V	D	I	V	E	Q	L	A	I	D	R	A	K	E	L	F	G	A	D	Y	A	N	V	Q	P	H	.	S	G	S
Query Conservation												.	.					.	.	.																																																										.
Alig confidence												.	.					.	.	.															.	.	.	.	.	.	.	.																																				.
Template Conservation																																			.	.	.	.	.	.	.	.
Template Sequence		G	R	R	Y	L	D	G	S	S	G	A	L	V	A	N	I	G	H	G	R	A	E	V	G	E	R	M	A	A	Q	A	A	R	.	.	.	.	.	.	.	.	L	P	F	V	H	G	S	Q	F	S	S	D	V	L	E	E	Y	A	G	R	L	A	R	F	V	G	L	P	T	F	R	F	W	A	V	S	G	G	S
Template Known Secondary structure								T	T					T		T	T		B																.	.	.	.	.	.	.	.						T	T	T																	T	T		T	T							S	S
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60									.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		100	.	.	.	.	.	.	.									.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.				.
Predicted Secondary structure										.	.	.	.	.	.	.	.																																																													.	.	.
Query SS confidence										.	.	.	.	.	.	.	.																																																													.	.	.
Query Sequence		Q	A	N	F	A	V	Y	T	.	.	.	.	.	.	.	.	A	L	L	E	P	G	D	T	V	L	G	M	N	L	A	H	G	G	H	L	T	H	G	S	P	V	N	F	S	G	K	L	Y	N	I	V	P	Y	G	I	D	A	T	G	H	I	D	Y	A	D	L	E	K	Q	A	K	E	H	K	P	.	.	.	K
Query Conservation										.	.	.	.	.	.	.	.																																																													.	.	.
Alig confidence										.	.	.	.	.	.	.	.																													.	.	.	.																													.	.	.
Template Conservation																																														.	.	.	.
Template Sequence		E	A	T	E	S	A	V	K	L	A	R	Q	Y	H	V	E	R	G	E	P	G	R	F	K	V	I	T	R	V	P	S	R	E	L	Y	T	P	L	M	R	P	E	A	W	.	.	.	.	P	K	L	P	K	P	D	P	A	R	N	G	A	E	D	A	E	G	L	R	A	L	L	E	R	E	G	P	E	T	V	A
Template Known Secondary structure																		T	T		T	T								T	T			T	T	T	G	G	G	G	S	G	G	G		.	.	.	.								T	T	S							T											G	G	G
Template Predicted Secondary structure																																														.	.	.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.					.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.								.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.				.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.																																				.	.	.
Query SS confidence																.	.	.	.	.	.	.																																				.	.	.
Query Sequence		M	I	I	G	G	F	S	A	Y	S	G	V	V	D	.	.	.	.	.	.	.	W	A	K	M	R	E	I	A	D	S	I	G	A	Y	L	F	V	D	M	A	H	V	A	G	L	V	A	A	G	V	Y	P	N	P	V	.	.	.	P	H	A	H	V	V	T	T	T	T	H	K	T	L	A	G	P	R	G	G	L
Query Conservation																.	.	.	.	.	.	.																																				.	.	.
Alig confidence																.	.	.	.	.	.	.																																				.	.	.
Template Conservation
Template Sequence		A	F	M	A	E	P	V	V	G	A	S	D	A	A	L	A	P	A	P	G	Y	Y	E	R	V	R	D	I	C	D	E	A	G	I	I	F	I	A	D	E	V	M	S	G	M	G	R	C	G	S	P	L	A	L	S	R	W	S	G	V	T	P	D	I	A	V	L	G	K	G	L	A	A	G	Y	A	P	L	A	G
Template Known Secondary structure							S	S			G	G	G	T	T					T	T													T								T	T	T	T	T	T	T	T	S	S	S	S	G	G	G	G	T	T	T				S						G	G	G	T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	A	K	G	G	S	E	E	L	Y	K	K	L	N	S	A	V	F	P	G	G	Q	G	G	P	L	M	H	V	I	A	G	K	A	V	A	L	K	E	A	M	E	P	E	F	K	T	Y	Q	Q	Q	V	A	K	N	A	K	A	M	V	E	V	F	L	E	R	G	Y	K	V	V	S	G	G	T	D	N	H	L
Query Conservation
Alig confidence																.	.																																																													.
Template Conservation																.	.																																																													.
Template Sequence		L	L	A	A	P	Q	V	Y	E	T	V	M	G	G	.	.	F	M	H	G	F	T	Y	A	G	H	P	V	S	V	A	A	G	L	S	V	L	D	I	V	E	R	E	D	L	T	G	A	A	K	E	R	G	A	Q	L	L	A	G	L	Q	A	L	Q	A	R	F	P	Q	M	M	Q	V	R	G	T	.	G	L	L
Template Known Secondary structure																.	.						T	T	T	T																		T	T																								T	T								.	T	T
Template Predicted Secondary structure																.	.																																																													.
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.			.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.		.	.	.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	V	D	L	V	D	K	N	L	T	G	K	E	A	D	A	A	L	G	R	A	N	I	T	V	N	K	N	S	V	P	N	D	P	K	S	P	F	V	T	S	G	I	R	V	G	T	P	A	I	T	R	R	G	F	K	E	A	E	A	K	E	L	A	G	W	M	C	D	V	L	D	S	I	N
Query Conservation
Alig confidence										.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.
Template Conservation										.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.
Template Sequence		L	G	V	V	L	G	D	L	.	.	I	A	S	R	I	G	A	A	A	L	K	R	G	L	I	T	Y	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	L	L	L	G	P	P	L	S	I	T	.	.	.	.	A	A	E	V	D	G	L	L	A	L	L	A	G	A	L	E	D	V	L
Template Known Secondary structure										.	.													T	B					.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T			.	.	.	.
Template Predicted Secondary structure										.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.
Template SS confidence
		353	.	.	.	.	.	.	360			.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.															.	380	.	.	.	.	.	.	.	.	.					390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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