Job Description P0A825 Confidence 99.97% Date Thu Jan 5 11:06:42 GMT 2012 Rank 95 Aligned Residues 345 % Identity 12% Template c3getA_ PDB info PDB header:transferase Chain: A: PDB Molecule:histidinol-phosphate aminotransferase; PDBTitle: crystal structure of putative histidinol-phosphate aminotransferase2 (np_281508.1) from campylobacter jejuni at 2.01 a resolution Resolution 2.01 Å

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		2	.	.	.	.	.	.	.	10	.	.	.					.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.			40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure														.	.	.	.																											.	.
Query SS confidence														.	.	.	.																											.	.
Query Sequence		L	K	R	E	M	N	I	A	D	Y	D	A	.	.	.	.	E	L	W	Q	A	M	E	Q	E	K	V	R	Q	E	E	H	I	E	L	I	A	S	E	N	Y	T	.	.	S	P	R	V	M	Q	A	Q	G	S	Q	L	T	N	K	Y	A	E	G	Y	P	G	K	R	Y	Y	G	G	C	E	Y	V	D	I	V	E
Query Conservation														.	.	.	.																											.	.
Alig confidence														.	.	.	.														.													.	.																									.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.																																							.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		X	K	F	N	E	F	L	N	N	L	S	N	Y	E	P	G	K	D	I	E	V	I	A	K	E	Y	G	V	K	.	E	V	I	K	L	A	S	N	E	N	P	F	G	T	P	P	K	A	I	E	C	L	R	Q	N	A	N	K	A	H	L	Y	P	D	D	S	X	I	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						G	G	G	G	G	S																T	T		S	.						S	S				T	T		S												G	G	G	T	T	S				T	T			.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																															.																																							.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		Q	L	A	I	D	R	A	K	E	L	F	G	A	D	Y	A	N	V	Q	P	H	S	G	.	S	Q	A	N	F	A	V	Y	T	A	L	L	E	P	G	D	T	V	L	G	M	N	L	A	H	G	G	H	L	T	H	G	S	P	V	N	F	S	G	K	L	Y	N	I	V	P	Y	G	I	D	A	T	G	H	I	D
Query Conservation																									.
Alig confidence		.																							.																																						.	.	.	.	.
Template Conservation		.																																																													.	.	.	.	.
Template Sequence		.	E	L	K	S	T	L	A	Q	K	Y	K	V	Q	N	E	N	I	I	I	G	A	G	S	D	Q	V	I	E	F	A	I	H	S	K	L	N	S	K	N	A	F	L	Q	A	G	V	T	F	A	X	Y	E	I	Y	A	K	Q	C	G	A	.	.	.	.	.	K	C	Y	K	T	Q	S	I	T	H	N	L	D	E
Template Known Secondary structure		.											T			G	G	G					S	S															T	T							S	S			T										T		.	.	.	.	.						S	S	S	S
Template Predicted Secondary structure		.																																																													.	.	.	.	.
Template SS confidence
			68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.						.	.	130	.	.	.	.	.	.	.	.	.	140	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.		.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.			.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.								.	.	220	.	.	.	.
Predicted Secondary structure																						.																		.	.																											.	.	.	.	.	.	.
Query SS confidence																						.																		.	.																											.	.	.	.	.	.	.
Query Sequence		Y	A	D	L	E	K	Q	A	K	E	H	K	P	K	M	I	I	G	G	F	.	S	A	Y	S	G	V	V	D	W	A	K	M	R	E	I	A	D	.	.	S	I	G	A	Y	L	F	V	D	M	A	H	V	A	G	L	V	A	A	G	V	Y	P	N	P	V	.	.	.	.	.	.	.	P	H	A	H	V	V	T
Query Conservation																						.																		.	.																											.	.	.	.	.	.	.
Alig confidence																						.																		.	.																											.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	K	K	L	Y	E	T	H	K	D	E	I	K	L	I	F	L	C	L	P	N	N	P	L	G	E	C	L	D	A	S	E	A	T	E	F	I	K	G	V	N	E	D	C	L	V	V	I	D	A	A	Y	N	E	F	A	S	F	K	D	S	K	K	H	L	E	P	C	E	L	I	K	E	F	D	N	V	L	Y	L
Template Known Secondary structure									T	T	T	T								S	S		T	T	T															T	S		T	T	S							T	T									G	G	G												T	T
Template Predicted Secondary structure
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		225	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		T	T	T	H	K	T	L	.	A	G	P	R	G	G	L	I	L	A	K	G	G	S	E	E	L	Y	K	K	L	N	S	A	V	F	P	G	G	Q	G	G	P	L	M	H	V	I	A	G	K	A	V	A	L	K	E	A	M	E	P	E	F	K	T	Y	Q	Q	Q	V	A	K	N	A	K	A	M	V	E	V	F	L
Query Conservation									.
Alig confidence									.																											.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.
Template Sequence		G	T	F	S	L	Y	G	L	G	G	L	R	I	G	Y	G	I	A	N	A	N	I	I	S	A	F	Y	K	L	R	A	P	F	N	.	.	.	.	.	.	.	.	V	S	N	L	A	L	K	A	A	V	A	A	X	D	D	D	E	F	T	E	K	T	L	E	N	N	F	S	Q	X	E	L	Y	K	E	F	A	K
Template Known Secondary structure								S		T	T	T																			S		T	T		.	.	.	.	.	.	.	.	S													T
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.									.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	G	Y	K	V	V	S	G	G	T	D	N	H	L	F	L	V	D	L	V	D	K	N	L	T	G	K	E	A	D	A	A	L	G	R	A	N	I	T	V	N	K	N	S	V	P	N	D	P	K	S	P	F	V	T	S	G	I	R	V	G	T	P	A	I	T	R	R	G	F	K	E	A	E	A	K	E	L	A
Query Conservation
Alig confidence													.	.	.	.																																		.	.	.	.	.	.	.										.	.	.	.	.	.	.
Template Conservation													.	.	.	.																																		.	.	.	.	.	.	.										.	.	.	.	.	.	.
Template Sequence		K	H	N	I	K	I	I	D	S	Y	T	.	.	.	.	N	F	I	T	Y	F	F	D	E	K	N	S	T	D	L	S	E	K	L	L	K	K	G	I	I	I	R	N	L	K	S	Y	G	.	.	.	.	.	.	.	L	N	A	I	R	I	T	I	G	.	.	.	.	.	.	.	T	S	Y	E	N	E	K	F	F
Template Known Secondary structure			T	T							S	S	.	.	.	.	S							S	S	S											T	T	T							G	G	G	T	.	.	.	.	.	.	.		S								.	.	.	.	.	.	.
Template Predicted Secondary structure													.	.	.	.																																		.	.	.	.	.	.	.										.	.	.	.	.	.	.
Template SS confidence
		295	.	.	.	.	300	.	.	.	.	.					.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.								.	340	.	.	.	.	.	.	.								.	.	350	.	.	.	.	.	.
		384	.	.	.	.	.	390	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	W	M	C	D	V	L	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	E	F	D	K	I	L	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		357	.	.	360	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions