Job Description P0A825 Confidence 99.96% Date Thu Jan 5 11:06:42 GMT 2012 Rank 140 Aligned Residues 336 % Identity 14% Template c3fdbA_ PDB info PDB header:transferase Chain: A: PDB Molecule:putative plp-dependent beta-cystathionase; PDBTitle: crystal structure of a putative plp-dependent beta-cystathionase2 (aecd, dip1736) from corynebacterium diphtheriae at 1.99 a resolution Resolution 1.99 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.				.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.			90	.	.	.	.	.
Predicted Secondary structure																	.	.																	.	.	.																																					.	.
Query SS confidence																	.	.																	.	.	.																																					.	.
Query Sequence		K	V	R	Q	E	E	H	I	E	L	I	A	S	E	N	.	.	Y	T	S	P	R	V	M	Q	A	Q	G	S	Q	L	T	N	.	.	.	K	Y	A	E	G	Y	P	G	K	R	Y	Y	G	G	C	E	Y	V	D	I	V	E	Q	L	A	I	D	R	A	K	E	L	F	G	A	D	.	.	Y	A	N	V	Q	P
Query Conservation																	.	.																	.	.	.																																					.	.
Alig confidence																	.	.																	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	R	Y	G	Q	G	V	L	P	L	W	V	A	E	S	D	F	S	T	C	P	A	V	L	Q	A	I	T	D	A	V	Q	R	E	A	F	G	Y	Q	P	D	G	S	.	.	.	.	.	.	.	.	.	.	.	.	L	L	S	Q	A	T	A	E	F	Y	A	D	R	Y	G	Y	Q	A	R	P	E	W	I	F	P
Template Known Secondary structure			S	S		T	T	S					S	S				S																T	T			S	S			S	S		.	.	.	.	.	.	.	.	.	.	.	.																				G	G	G
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60													.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		96	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		H	S	G	.	S	Q	A	N	F	A	V	Y	T	A	L	L	E	P	G	D	T	V	L	G	M	N	L	A	H	G	G	H	L	T	H	G	S	P	V	N	F	S	G	K	L	Y	N	I	V	P	Y	G	I	D	A	T	G	H	I	D	Y	A	D	L	E	K	Q	A	K	E	H	K	P	K	M	I	I	G	G	F
Query Conservation					.
Alig confidence					.																											.	.	.																				.	.	.	.
Template Conservation																																.	.	.																				.	.	.	.
Template Sequence		I	P	D	V	V	R	G	L	Y	I	A	I	D	H	F	T	P	A	Q	S	K	V	I	V	P	T	P	A	Y	P	.	.	.	P	F	F	H	L	L	S	A	T	Q	R	E	G	I	F	I	D	A	T	.	.	.	.	G	G	I	N	L	H	D	V	E	K	G	F	Q	A	G	A	R	S	I	L	L	C	N	P
Template Known Secondary structure			S														S		T	T								S			T	.	.	.										T									T	.	.	.	.	T	S												T	T								S	S
Template Predicted Secondary structure																																.	.	.																				.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.				.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.					.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
			175	.	.	.	.	180	.	.				.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.					.	.	.	.	.	.	.	.	230	.			.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure		.									.	.	.																																								.	.	.	.											.	.
Query SS confidence		.									.	.	.																																								.	.	.	.											.	.
Query Sequence		.	S	A	Y	S	G	V	V	D	.	.	.	W	A	K	M	R	E	I	A	D	S	I	G	A	Y	L	F	V	D	M	A	H	V	A	G	L	V	A	A	G	V	Y	P	N	P	V	P	H	A	H	.	.	.	.	V	V	T	T	T	T	H	K	T	L	.	.	A	G	P	R	G	G	L	I	L	A	K	G	G
Query Conservation		.									.	.	.																																								.	.	.	.											.	.
Alig confidence		.									.	.	.																																								.	.	.	.											.	.
Template Conservation
Template Sequence		Y	N	P	L	G	X	V	F	A	P	E	W	L	N	E	L	C	D	L	A	H	R	Y	D	A	R	V	L	V	D	E	I	H	A	P	L	V	F	D	G	Q	H	T	V	A	A	G	V	S	D	T	A	A	S	V	C	I	T	I	T	A	P	S	A	W	N	I	A	G	L	K	C	A	Q	I	I	F	S	N	P
Template Known Secondary structure		B	T	T	T	T	B																	T	T								T	T	G	G	G	B	S	S	S					G	G	G	S																				G	G	G									S
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.			.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure																																																															.	.
Query SS confidence																																																															.	.
Query Sequence		S	E	E	L	Y	K	K	L	N	S	A	V	F	P	G	G	Q	G	G	P	L	M	H	V	I	A	G	K	A	V	A	L	K	E	A	M	E	P	E	F	K	T	Y	Q	Q	Q	V	A	K	N	A	K	A	M	V	E	V	F	L	E	R	.	.	G	Y	K	V	V	S	G	G	T	D	N	H	L	F	L	V	D
Query Conservation																																																															.	.
Alig confidence																				.	.	.	.																																								.	.										.
Template Conservation																				.	.	.	.																																																			.
Template Sequence		S	D	A	E	H	W	Q	Q	L	S	P	V	I	K	D	G	A	S	.	.	.	.	T	L	G	L	I	A	A	E	A	A	Y	R	Y	G	T	D	F	L	N	Q	E	V	A	Y	L	K	N	N	H	D	F	L	L	H	E	I	P	K	R	I	P	G	A	K	I	T	P	X	Q	A	.	T	Y	L	X	W	I	D
Template Known Secondary structure										S										.	.	.	.																																								S	T	T							S	B	.		S
Template Predicted Secondary structure																				.	.	.	.																																																			.
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.					.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.		.	.	310	.	.	.	.
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	D	K	N	L	T	G	K	E	A	D	A	A	L	G	R	A	N	I	T	V	N	K	N	S	V	P	N	D	P	K	S	P	F	V	T	S	G	I	R	V	G	T	P	A	I	T	R	R	G	F	K	E	A	E	A	K	E	L	A	G	W	M	C	D	V	L	D	S
Query Conservation
Alig confidence																								.	.	.	.																			.	.	.	.	.	.
Template Conservation																								.	.	.	.																			.	.	.	.	.	.
Template Sequence		F	R	D	T	T	I	E	G	S	P	S	E	F	F	I	E	K	A	K	V	A	X	.	.	.	.	N	D	G	A	W	F	G	E	D	G	T	G	F	C	R	L	N	F	.	.	.	.	.	.	A	T	S	R	E	V	L	E	E	A	I	D	R	X	A	K	A	V	S	H
Template Known Secondary structure			T	T	S				S															.	.	.	.			G	G	G	G		G	G	G	T	T							.	.	.	.	.	.		S																	T	T
Template Predicted Secondary structure																								.	.	.	.																			.	.	.	.	.	.
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.					.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.							.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions