Job Description P0A825 Confidence 99.97% Date Thu Jan 5 11:06:42 GMT 2012 Rank 52 Aligned Residues 348 % Identity 16% Template c3f9tB_ PDB info PDB header:lyase Chain: B: PDB Molecule:l-tyrosine decarboxylase mfna; PDBTitle: crystal structure of l-tyrosine decarboxylase mfna (ec 4.1.1.25)2 (np_247014.1) from methanococcus jannaschii at 2.11 a resolution Resolution 2.11 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.				.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.
Query SS confidence																	.	.	.
Query Sequence		D	A	E	L	W	Q	A	M	E	Q	E	K	V	R	Q	.	.	.	E	E	H	I	E	L	I	A	S	E	N	Y	T	S	P	R	V	M	Q	A	Q	G	S	Q	L	T	N	K	Y	A	E	G	Y	P	G	K	R	Y	Y	G	G	C	E	Y	V	D	I	V	E	Q	L	A	I	D	R	A	K	E	L	F	G	A
Query Conservation																	.	.	.
Alig confidence																	.	.	.																										.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.
Template Sequence		E	K	E	I	L	E	E	L	K	K	Y	R	S	L	D	L	K	Y	E	D	G	N	I	F	G	S	X	C	S	N	V	L	P	I	T	R	K	I	V	D	I	F	L	.	.	.	.	.	.	.	E	T	N	L	G	D	P	G	L	F	K	G	T	K	L	L	E	E	K	A	V	A	L	L	G	S	L	L	N	N
Template Known Secondary structure														T	T	S			G	G	G	S		B		S		S						T										T	.	.	.	.	.	.	.	T			T	T	S	G	G	G																			T	T
Template Predicted Secondary structure																																													.	.	.	.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.								.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		89	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.														.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure												.														.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.														.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	Y	A	N	V	Q	P	H	S	G	.	S	Q	A	N	F	A	V	Y	T	A	L	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	P	G	D	T	V	L	G	M	N	L	A	H	G	G	H	L	T	H	G	S	P	V	N	F	S	G	K	L	Y	N	I	V	P	Y	G	I	D	A	T	G	H	I	D
Query Conservation												.														.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.														.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.																			.	.
Template Conservation																																																			.	.	.																			.	.
Template Sequence		K	D	A	Y	G	H	I	V	S	G	G	T	E	A	N	L	X	A	L	R	C	I	K	N	I	W	R	E	K	R	R	K	G	L	S	K	N	E	H	P	K	I	I	V	P	I	T	A	H	.	.	.	F	S	F	E	K	G	R	E	X	X	D	L	E	Y	I	Y	A	P	.	.	I	K	E	D	Y	T	I	D
Template Known Secondary structure		T	T							S																							T	T					S	S							T	T			.	.	.	T										T								.	.	B		T	T	S	S	B
Template Predicted Secondary structure																																																			.	.	.																			.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.				.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150			.	.	.	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.			.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.											.	220	.	.
Predicted Secondary structure																				.	.																																															.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.																																															.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	A	D	L	E	K	Q	A	K	E	H	K	P	K	M	I	I	G	.	.	G	F	S	A	Y	S	G	V	V	D	W	A	K	M	R	E	I	A	D	S	I	G	A	Y	L	F	V	D	M	A	H	V	A	G	L	V	A	A	G	V	Y	P	N	P	V	P	.	.	.	.	.	.	.	.	.	.	H	A	H	V
Query Conservation																				.	.																																															.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.																																															.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	K	F	V	K	D	A	V	E	D	Y	D	V	D	G	I	I	G	I	A	G	T	T	E	L	G	T	I	D	N	I	E	E	L	S	K	I	A	K	E	N	N	I	Y	I	H	V	D	A	A	F	G	G	L	V	I	P	F	L	D	D	K	Y	K	K	K	G	V	N	Y	K	F	D	F	S	L	G	V	D	S
Template Known Secondary structure												S									B	S		T	T	T			B														T								T	T	G	G	G	T	G	G	G			G	G	G			T	T						S	G	G	G	T		S
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.		.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.						.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure																.																	.	.	.	.	.
Query SS confidence																.																	.	.	.	.	.
Query Sequence		V	T	T	T	T	H	K	T	L	A	G	P	R	G	.	G	L	I	L	A	K	G	G	S	E	E	L	Y	K	K	L	.	.	.	.	.	N	S	A	V	F	P	G	G	Q	G	G	P	L	M	H	V	I	A	G	K	A	V	A	L	K	E	A	M	E	P	E	F	K	T	Y	Q	Q	Q	V	A	K	N	A	K
Query Conservation																.																	.	.	.	.	.
Alig confidence																.																	.	.	.	.	.
Template Conservation
Template Sequence		I	T	I	D	P	H	K	X	G	H	C	P	I	P	S	G	G	I	L	F	K	D	I	G	Y	K	R	Y	L	D	V	D	A	P	Y	L	T	E	T	R	Q	A	T	I	L	G	T	R	V	G	F	G	G	A	C	T	Y	A	V	L	R	Y	L	G	R	E	G	Q	R	K	I	V	N	E	C	X	E	N	T	L
Template Known Secondary structure						T	T	T	T	T				S	S							S	S	G	G	G	G	G	G	T					T	T	S	S	S	S				S	S		S	S			S
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	V	E	V	F	L	E	R	G	Y	K	V	V	S	G	G	T	D	N	H	L	F	L	V	D	L	V	D	K	N	L	T	G	K	E	A	D	A	A	L	G	R	A	N	I	T	V	N	K	N	S	V	P	N	D	P	K	S	P	F	V	T	S	G	I	R	V	G	T	P	A	I	T	R	R	G	F	K	E
Query Conservation
Alig confidence																				.								.	.	.	.																											.	.	.	.	.	.	.	.	.											.	.	.	.
Template Conservation																				.								.	.	.	.																											.	.	.	.	.	.	.	.	.											.	.	.	.
Template Sequence		Y	L	Y	K	K	L	K	E	N	N	F	K	P	V	I	E	P	I	.	L	N	I	V	A	I	E	.	.	.	.	D	E	D	Y	K	E	V	C	K	K	L	R	D	R	G	I	Y	V	S	V	C	N	C	V	K	A	.	.	.	.	.	.	.	.	.	L	R	I	V	V	X	P	H	I	K	.	.	.	.	R
Template Known Secondary structure										T	T			B	S	S			S	.	S	S						.	.	.	.		T	T											T	T		B					S	S	S	S		.	.	.	.	.	.	.	.	.							T	T			.	.	.	.
Template Predicted Secondary structure																				.								.	.	.	.																											.	.	.	.	.	.	.	.	.											.	.	.	.
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.		.	.	.	340	.	.	.					.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.										370	.	.	.	.	.	.	.	.	.					380
		377	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	A	K	E	L	A	G	W	M	C	D	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	H	I	D	N	F	I	E	I	L	N	S	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		381	.	.	.	.	.	.	.	.	390	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions