Job Description P0A825 Confidence 99.95% Date Thu Jan 5 11:06:42 GMT 2012 Rank 166 Aligned Residues 312 % Identity 14% Template c3ez1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:aminotransferase mocr family; PDBTitle: crystal structure of putative aminotransferase (mocr family)2 (yp_604413.1) from deinococcus geothermalis dsm 11300 at 2.60 a3 resolution Resolution 2.60 Å

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		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.															.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	Y	G	G	C	E	Y	V	D	I	V	E	Q	L	A	I	D	R	A	K	E	L	F	G	A	D	Y	A	N	V	Q	P	H	S	G	S	Q	A	N	F	A	V	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	A	L	L	E	P	G	D	T	V	L	G	M	N	L	A	H	G	G	H	L	T	H
Query Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.
Template Sequence		Y	P	G	G	V	A	G	L	P	S	.	.	.	.	A	R	A	L	F	A	G	Y	L	D	V	K	A	E	N	V	L	V	W	N	N	S	S	L	E	L	Q	G	L	V	L	T	F	A	L	L	H	G	V	R	G	S	T	G	P	W	L	S	Q	T	P	K	X	I	V	T	V	P	G	Y	D	R	H	F	L	L
Template Known Secondary structure		S		S		T	T					.	.	.	.									T	T	S		G	G	G					S	S																T			T	T		S	S		G	G	G	G									S
Template Predicted Secondary structure												.	.	.	.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.					.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.				.	.	.	.	.	180	.	.	.	.	.	.	.	.	.					190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure																																						.										.	.	.																.	.	.	.
Query SS confidence																																						.										.	.	.																.	.	.	.
Query Sequence		G	S	P	V	N	F	S	G	K	L	Y	N	I	V	P	Y	G	I	D	A	T	G	H	I	D	Y	A	D	L	E	K	Q	A	K	E	H	.	K	P	K	M	I	I	G	G	F	.	.	.	S	A	Y	S	G	V	V	D	W	A	K	M	R	E	I	.	.	.	.	A	D	S	I	G	A	Y	L	F	V	D	M
Query Conservation																																						.										.	.	.																.	.	.	.
Alig confidence							.	.	.	.	.													.														.										.	.	.																.	.	.	.
Template Conservation							.	.	.	.	.													.
Template Sequence		L	Q	T	L	G	.	.	.	.	.	F	E	L	L	T	V	D	X	Q	S	D	G	.	P	D	V	D	A	V	E	R	L	A	G	T	D	P	S	V	K	G	I	L	F	V	P	T	Y	S	N	P	G	G	E	T	I	S	L	E	K	A	R	R	L	A	G	L	Q	A	A	A	P	D	F	T	I	F	A	D	D
Template Known Secondary structure						T	.	.	.	.	.										T	T		.												S		T	T								S	S	S		T	T	T														T				S	S	T	T
Template Predicted Secondary structure							.	.	.	.	.													.
Template SS confidence
		140	.	.	.	.						.	.	.	.	.	150	.	.	.	.	.	.		.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.												.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.															.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.															.
Query Sequence		A	H	V	A	G	L	V	A	A	G	V	Y	P	N	P	V	.	.	.	.	.	.	.	.	.	.	.	P	H	A	H	V	V	T	T	T	T	H	K	T	L	.	A	G	P	R	G	G	L	I	L	A	K	G	G	S	E	E	L	Y	K	K	L	N	S	A	V	F	P	G	G	Q	G	G	P	L	M	H	V	I
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.															.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation
Template Sequence		A	Y	R	V	H	H	L	V	E	E	D	R	A	E	P	V	N	F	V	V	L	A	R	D	A	G	Y	P	D	R	A	F	V	F	A	S	T	S	K	I	T	F	A	G	A	G	L	G	F	V	A	S	S	E	D	N	I	R	W	L	S	K	Y	L	G	A	Q	S	I	G	P	N	K	V	E	Q	A	R	H	V
Template Known Secondary structure		T	T	S	S		B			S	S	S															T		T	T	S							S	T	T	T	S		S	S	S	S																					S		S
Template Predicted Secondary structure
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		270	.	.	.				.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.		.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure						.	.	.																																.
Query SS confidence						.	.	.																																.
Query Sequence		A	G	K	A	.	.	.	V	A	L	K	E	A	M	E	P	E	F	K	T	Y	Q	Q	Q	V	A	K	N	A	K	A	M	V	E	V	F	L	E	.	R	G	Y	K	V	V	S	G	G	T	D	N	H	L	F	L	V	D	L	V	D	K	N	L	T	G	K	E	A	D	A	A	L	G	R	A	N	I	T	V	N
Query Conservation						.	.	.																																.
Alig confidence						.	.	.																																.																							.	.
Template Conservation																																																															.	.
Template Sequence		K	F	L	T	E	Y	P	G	G	L	E	G	L	X	R	D	H	A	A	I	I	A	P	K	F	R	A	V	D	E	V	L	R	A	E	L	G	E	G	G	E	Y	A	T	W	T	L	P	K	G	G	Y	F	I	S	L	D	T	A	E	P	.	.	V	A	D	R	V	V	K	L	A	E	A	A	G	V	S	L	T
Template Known Secondary structure							S	T	T																													T	T	T	T	S	S							S	B	S	S							S	S	S	.	.												T	T
Template Predicted Secondary structure																																																															.	.
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.			.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	N	S	V	P	N	D	P	K	S	P	F	V	T	S	G	I	R	V	G	T	P	A	I	T	R	R	G	F	K	E	A	E	A	K	E	L	A	G	W	M	C	D	V	L	D	S
Query Conservation
Alig confidence																											.	.	.	.	.
Template Conservation																											.	.	.	.	.
Template Sequence		P	A	G	A	T	Y	P	A	G	Q	D	P	H	N	R	N	L	R	L	A	P	T	R	P	P	.	.	.	.	.	V	E	E	V	R	T	A	X	Q	V	V	A	A	C	I	R	L
Template Known Secondary structure			T	T	T	T	S	S	T	T			S	S	S								S	S	S		.	.	.	.	.
Template Predicted Secondary structure																											.	.	.	.	.
Template SS confidence
		372	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.						.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions