Job Description P0A825 Confidence 99.96% Date Thu Jan 5 11:06:42 GMT 2012 Rank 113 Aligned Residues 332 % Identity 17% Template c3eucB_ PDB info PDB header:transferase Chain: B: PDB Molecule:histidinol-phosphate aminotransferase 2; PDBTitle: crystal structure of histidinol-phosphate aminotransferase2 (yp_297314.1) from ralstonia eutropha jmp134 at 2.05 a resolution Resolution 2.05 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.										.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.															.
Query SS confidence																	.	.	.	.	.	.	.	.	.															.
Query Sequence		Y	D	A	E	L	W	Q	A	M	E	Q	E	K	V	R	.	.	.	.	.	.	.	.	.	Q	E	E	H	I	E	L	I	A	S	E	N	Y	T	.	S	P	R	V	M	Q	A	Q	G	S	Q	L	T	N	K	Y	A	E	G	Y	P	G	K	R	Y	Y	G	G	C	E	Y	V	D	I	V	E	Q	L	A	I	D
Query Conservation																	.	.	.	.	.	.	.	.	.															.
Alig confidence																	.	.	.	.	.	.	.	.	.															.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	D	P	S	L	I	E	R	I	I	R	D	D	V	R	A	X	G	A	Y	H	V	P	D	S	H	G	L	V	K	L	D	A	X	E	N	Y	R	L	P	P	A	L	R	S	E	L	A	A	R	L	G	E	V	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	L	R	A
Template Known Secondary structure											S							S									T	T	S				S	S	S																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.																				60	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure													.								.
Query SS confidence													.								.
Query Sequence		R	A	K	E	L	F	G	A	D	Y	A	.	N	V	Q	P	H	S	G	.	S	Q	A	N	F	A	V	Y	T	A	L	L	E	P	G	D	T	V	L	G	M	N	L	A	H	G	G	H	L	T	H	G	S	P	V	N	F	S	G	K	L	Y	N	I	V	P	Y	G	I	D	A	T	G	H	I	D	Y	A	D	L
Query Conservation													.								.
Alig confidence													.								.																											.	.	.																		.	.
Template Conservation																																																.	.	.																		.	.
Template Sequence		K	L	K	E	V	X	Q	V	P	A	G	X	E	V	L	L	G	N	G	S	D	E	I	I	S	X	L	A	L	A	A	A	R	P	G	A	K	V	X	A	P	V	P	G	F	V	.	.	.	X	Y	A	X	S	A	Q	F	A	G	L	E	F	V	G	V	P	.	.	L	R	A	D	F	T	L	D	R	G	A	X
Template Known Secondary structure								T			T	T																				T			T	T								S				.	.	.									T	T								.	.			T	T
Template Predicted Secondary structure																																																.	.	.																		.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.				120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140	.	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.						180	.	.	.	.	.	.	.	.	.	190	.	.	.			.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure																							.	.	.	.	.															.	.
Query SS confidence																							.	.	.	.	.															.	.
Query Sequence		E	K	Q	A	K	E	H	K	P	K	M	I	I	G	G	F	S	A	Y	S	G	.	.	.	.	.	V	V	D	W	A	K	M	R	E	I	A	D	S	I	.	.	G	A	Y	L	F	V	D	M	A	H	V	A	G	L	V	A	A	G	V	Y	P	N	P	V	P	H	A	H	V	V	T	T	T	T	H	K	T	L
Query Conservation																							.	.	.	.	.															.	.
Alig confidence																							.	.	.	.	.															.	.
Template Conservation
Template Sequence		L	A	A	X	A	E	H	Q	P	A	I	V	Y	L	A	Y	P	N	N	P	T	G	N	L	F	D	A	A	D	X	E	A	I	V	R	A	A	Q	G	S	V	C	R	S	L	V	V	V	D	E	A	Y	Q	P	F	A	Q	E	S	W	X	S	R	L	T	D	F	G	N	L	L	V	X	R	T	V	S	K	L	G
Template Known Secondary structure											S						S	S		T	T	T																T	B	T	T	S		B								T	T			S	S	S			S	G	G	G	G	G	T		T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
			232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.		.	.	.	.
Predicted Secondary structure		.																																																																											.
Query SS confidence		.																																																																											.
Query Sequence		.	A	G	P	R	G	G	L	I	L	A	K	G	G	S	E	E	L	Y	K	K	L	N	S	A	V	F	P	G	G	Q	G	G	P	L	M	H	V	I	A	G	K	A	V	A	L	K	E	A	M	E	P	E	F	K	T	Y	Q	Q	Q	V	A	K	N	A	K	A	M	V	E	V	F	L	E	R	.	G	Y	K	V
Query Conservation		.																																																																											.
Alig confidence		.																						.	.	.	.	.	.	.	.																																														.
Template Conservation																								.	.	.	.	.	.	.	.
Template Sequence		L	A	G	I	R	L	G	Y	V	A	G	D	P	Q	W	L	E	Q	L	D	K	V	.	.	.	.	.	.	.	.	R	P	P	Y	N	V	N	V	L	T	E	A	T	A	L	F	A	L	E	H	V	A	V	L	D	E	Q	A	A	Q	L	R	A	E	R	S	R	V	A	E	G	X	A	A	H	G	G	V	T	V
Template Known Secondary structure			S	S																	G	G	G	.	.	.	.	.	.	.	.	S		T	T		S													T																									T	S	T	T
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250									.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	G	G	T	D	N	H	L	F	L	V	D	L	V	D	K	N	L	T	G	K	E	A	D	A	A	L	G	R	A	N	I	T	V	N	K	N	S	V	P	N	D	P	K	S	P	F	V	T	S	G	I	R	V	G	T	P	A	I	T	R	R	G	F	K	E	A	E	A	K	E	L	A	G	W	M	C	D	V
Query Conservation
Alig confidence						.	.										.	.	.	.																	.	.	.	.																				.	.	.	.	.	.	.
Template Conservation						.	.										.	.	.	.																	.	.	.	.																				.	.	.	.	.	.	.
Template Sequence		F	P	S	A	.	.	A	N	F	L	L	A	R	V	P	.	.	.	.	D	A	A	Q	T	F	D	R	L	L	A	R	K	V	L	I	.	.	.	.	K	N	V	S	K	X	H	P	L	L	A	N	C	L	R	V	T	V	S	.	.	.	.	.	.	.	T	P	E	E	N	A	Q	F	L	E	A	F	A	A	S
Template Known Secondary structure					S	.	.	S	S							S	.	.	.	.												T	T				.	.	.	.				T	T	S		G	G	G	T	T								.	.	.	.	.	.	.
Template Predicted Secondary structure						.	.										.	.	.	.																	.	.	.	.																				.	.	.	.	.	.	.
Template SS confidence
		301	.	.	.			.	.	.	.	.	310	.	.	.					.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.					330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.								.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
		390	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		364	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions