Job Description P0A825 Confidence 99.96% Date Thu Jan 5 11:06:42 GMT 2012 Rank 131 Aligned Residues 357 % Identity 14% Template c3eleB_ PDB info PDB header:transferase Chain: B: PDB Molecule:amino transferase; PDBTitle: crystal structure of amino transferase (rer070207001803) from2 eubacterium rectale at 2.10 a resolution Resolution 2.10 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.			.	.	.	.	30	.	.	.	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure															.	.													.	.																																																			.
Query SS confidence															.	.													.	.																																																			.
Query Sequence		A	E	L	W	Q	A	M	E	Q	E	K	V	R	.	.	Q	E	E	H	I	E	L	I	A	S	E	N	.	.	Y	T	S	P	R	V	M	Q	A	Q	G	S	Q	L	T	N	K	Y	A	E	G	Y	P	G	K	R	Y	Y	G	G	C	E	Y	V	D	I	V	E	Q	L	A	I	D	R	A	K	E	L	F	G	.
Query Conservation															.	.													.	.																																																			.
Alig confidence															.	.													.	.																									.	.	.																								.
Template Conservation																																																							.	.	.
Template Sequence		R	E	L	F	E	Y	G	K	K	R	A	A	I	V	G	K	E	N	V	Y	D	F	S	I	G	N	P	S	I	P	A	P	Q	I	V	N	D	T	I	K	E	L	V	T	D	Y	D	S	V	A	L	H	G	.	.	.	Y	T	S	A	Q	G	D	V	E	T	R	A	A	I	A	E	F	L	N	N	T	H	G	T
Template Known Secondary structure																	G	G	G											S																	S							S	.	.	.				T	T
Template Predicted Secondary structure																																																							.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70				.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
			88	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure		.												.														.
Query SS confidence		.												.														.
Query Sequence		.	A	D	Y	A	N	V	Q	P	H	S	G	.	S	Q	A	N	F	A	V	Y	T	A	L	L	E	.	P	G	D	T	V	L	G	M	N	L	A	H	G	G	H	L	T	H	G	S	P	V	N	F	S	G	K	L	Y	N	I	V	P	Y	G	I	D	A	T	G	H	I	D	Y	A	D	L	E	K	Q	A	K	E
Query Conservation		.												.														.
Alig confidence		.												.														.																		.	.	.																.
Template Conservation																																														.	.	.																.
Template Sequence		H	F	N	A	D	N	L	Y	X	T	X	G	A	A	A	S	L	S	I	C	F	R	A	L	T	S	D	A	Y	D	E	F	I	T	I	A	P	Y	F	P	E	Y	K	V	.	.	.	F	V	N	A	A	G	A	R	L	V	E	V	P	A	D	.	T	E	H	F	Q	I	D	F	D	A	L	E	E	R	I	N	A
Template Known Secondary structure					G	G	G					S	S															S	T	T							S	S			T	T				.	.	.					T	T										.	T	T	T	S	S									T			T
Template Predicted Secondary structure																																														.	.	.																.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.				.	140	.	.	.	.	.	.	.	.	.	150	.	.	.		.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		165	.	.	.	.	170	.	.	.	.		.	.	.	.	.	180	.	.				.	.	.	.	.	.	.	190	.	.	.	.							.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.			.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure												.									.	.	.													.	.	.	.	.	.																												.	.
Query SS confidence												.									.	.	.													.	.	.	.	.	.																												.	.
Query Sequence		H	K	P	K	M	I	I	G	G	F	.	S	A	Y	S	G	V	V	D	.	.	.	W	A	K	M	R	E	I	A	D	S	I	G	.	.	.	.	.	.	A	Y	L	F	V	D	M	A	H	V	A	G	L	V	A	A	G	V	Y	P	N	P	V	P	H	A	H	.	.	V	V	T	T	T	T	H	K	T	L	A
Query Conservation												.									.	.	.													.	.	.	.	.	.																												.	.
Alig confidence												.									.	.	.													.	.	.	.	.	.																												.	.
Template Conservation
Template Sequence		H	T	R	G	V	I	I	N	S	P	N	N	P	S	G	T	V	Y	S	E	E	T	I	K	K	L	S	D	L	L	E	K	K	S	K	E	I	G	R	P	I	F	I	I	A	D	E	P	Y	R	E	I	V	Y	D	G	I	K	V	P	F	V	T	K	Y	Y	D	N	T	L	V	C	Y	S	Y	S	K	S	L	S
Template Known Secondary structure		T								S	S		T	T	T																								T	S									T	T	T	T		B		T	T						G	G	G	T		S	S							S	T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
				233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	G	P	R	G	G	L	I	L	A	K	G	G	S	E	E	L	Y	K	K	L	N	S	A	V	F	P	G	G	Q	G	G	P	L	M	H	V	I	A	G	K	A	V	A	L	K	E	A	M	E	P	E	F	K	T	Y	Q	Q	Q	V	A	K	N	A	K	A	M	V	E	V	F	L	E	R	G	Y	K	V	V
Query Conservation		.	.
Alig confidence		.	.																										.	.	.
Template Conservation																													.	.	.
Template Sequence		L	P	G	E	R	I	G	Y	V	L	V	P	D	E	V	Y	D	K	A	E	L	Y	A	A	V	C	G	.	.	.	A	G	R	A	L	G	Y	V	C	A	P	S	L	F	Q	K	X	I	V	K	C	Q	G	A	T	G	D	I	N	A	Y	K	E	N	R	D	L	L	Y	E	G	L	T	R	I	G	Y	H	C	F
Template Known Secondary structure			G	G	G									T	T	S	T	T											.	.	.					T	T				S									T	T		T	T																							T
Template Predicted Secondary structure																													.	.	.
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.				.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	G	T	D	N	H	L	F	L	V	D	L	V	D	K	N	L	T	G	K	E	A	D	A	A	L	G	R	A	N	I	T	V	N	K	N	S	V	P	N	D	P	K	S	P	F	V	T	S	G	I	R	V	G	T	P	A	I	T	R	R	G	F	K	E	A	E	A	K	E	L	A	G	W	M	C	D	V	L
Query Conservation
Alig confidence						.									.	.																											.	.	.	.	.	.										.	.	.	.	.	.
Template Conservation						.									.	.																											.	.	.	.	.	.										.	.	.	.	.	.
Template Sequence		K	P	D	G	.	A	F	Y	X	F	V	K	A	.	.	L	E	D	D	S	N	A	F	C	E	K	A	K	E	E	D	V	L	I	V	A	A	D	G	F	G	.	.	.	.	.	.	C	P	G	W	V	R	I	S	Y	.	.	.	.	.	.	C	V	D	R	E	X	I	K	H	S	X	P	A	F	E	K	I	Y
Template Known Secondary structure				S	B	.	S	S							.	.	S	S	S												T	T						G	G	G	G	T	.	.	.	.	.	.		T	T							.	.	.	.	.	.		S
Template Predicted Secondary structure						.									.	.																											.	.	.	.	.	.										.	.	.	.	.	.
Template SS confidence
		328	.	330	.		.	.	.	.	.	.	.	.			340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.							.	.	.	.	370	.	.	.	.							.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
		391	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	I	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	K	Y	N
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		393	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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