Job Description P0A825 Confidence 99.94% Date Thu Jan 5 11:06:42 GMT 2012 Rank 187 Aligned Residues 330 % Identity 13% Template c3e77A_ PDB info PDB header:transferase Chain: A: PDB Molecule:phosphoserine aminotransferase; PDBTitle: human phosphoserine aminotransferase in complex with plp Resolution 2.50 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.			.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.			.
Predicted Secondary structure																						.																															.								.	.																	.	.
Query SS confidence																						.																															.								.	.																	.	.
Query Sequence		T	S	P	R	V	M	Q	A	Q	G	S	Q	L	T	N	K	Y	A	E	G	.	Y	P	G	K	R	Y	Y	G	G	C	E	Y	V	D	I	V	E	Q	L	A	I	D	R	A	K	E	L	F	G	A	.	D	Y	A	N	V	Q	P	.	.	H	S	G	S	Q	A	N	F	A	V	Y	T	A	L	L	E	.	.	P
Query Conservation																						.																															.								.	.																	.	.
Alig confidence																						.																			.												.								.	.																	.	.
Template Conservation																																									.
Template Sequence		L	P	H	S	V	L	L	E	I	Q	K	E	L	L	D	Y	K	G	V	G	I	S	V	L	E	M	S	H	R	S	S	D	F	A	K	I	I	N	N	.	T	E	N	L	V	R	E	L	L	A	V	P	D	N	Y	K	V	I	F	L	Q	G	G	G	C	G	Q	F	S	A	V	P	L	N	L	I	G	L	K	A
Template Known Secondary structure													T	S	S	S	G	G	G	S	S	S		T	T	T			T	T	S										.										T			T	T							S	S														G	G	G	S	T
Template Predicted Secondary structure																																									.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure																																																											.
Query SS confidence																																																											.
Query Sequence		G	D	T	V	L	G	M	N	L	A	H	G	G	H	L	T	H	G	S	P	V	N	F	S	G	K	L	Y	N	I	V	P	Y	G	I	D	A	T	G	H	I	D	Y	A	D	L	E	K	Q	A	K	E	H	K	P	K	M	.	I	I	G	G	F	S	A	Y	S	G	V	V	D	W	A	K	M	R	E	I	A	D
Query Conservation																																																											.
Alig confidence													.	.	.																																												.														.	.	.	.	.
Template Conservation													.	.	.																																																										.	.	.	.	.
Template Sequence		G	R	C	A	D	Y	V	V	T	G	A	.	.	.	W	S	A	K	A	A	E	E	A	K	K	F	G	T	I	N	I	V	H	P	K	L	G	S	Y	T	K	I	P	D	P	S	T	W	N	L	N	P	D	A	S	Y	V	Y	Y	C	A	N	E	T	V	H	G	V	E	F	D	.	.	.	.	.	F	I	P	D
Template Known Secondary structure		T									S		.	.	.										T	T	T	S						S				S	S	S		S				G	G	G					T	T		S						S			T	T	T	T				S	.	.	.	.	.	S
Template Predicted Secondary structure													.	.	.																																																										.	.	.	.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.				.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.						.	.	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.									.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.
Query Sequence		S	I	G	A	Y	L	F	V	D	M	A	H	V	A	G	L	V	A	A	G	V	Y	P	N	P	V	P	H	A	H	V	V	T	T	T	T	H	K	T	L	A	G	P	R	G	G	L	I	L	A	K	G	G	S	.	.	.	.	.	.	.	.	E	E	L	Y	K	K	L	N	S	A	V	F	P	G	G	Q	G	G
Query Conservation																																																								.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.																																			.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.
Template Sequence		V	K	G	A	V	L	V	C	D	M	S	S	N	F	L	.	.	.	.	.	S	K	P	V	D	V	S	K	F	G	V	I	F	A	G	A	Q	K	N	V	G	S	A	G	V	T	V	V	I	V	R	D	D	L	L	G	F	A	L	R	E	C	P	S	V	L	E	Y	K	V	Q	A	G	N	S	S	L	Y	N	T
Template Known Secondary structure			T	T								T	T	T	T	T	.	.	.	.	.	S	S				G	G	G		S						G	G	G	T	T	S		T	T								T	T	S		S				T	T	S		G	G	G							T	T	T	T		S	S
Template Predicted Secondary structure																	.	.	.	.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.						.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.		.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.		.	.	.	.	310	.	.	.	.	.	.	.				.	.	320	.	.	.	.	.	.	.	.	.	330				.	.	.	.	.
Predicted Secondary structure																					.																								.													.	.	.														.	.	.
Query SS confidence																					.																								.													.	.	.														.	.	.
Query Sequence		P	L	M	H	V	I	A	G	K	A	V	A	L	K	E	A	M	E	P	.	E	F	K	T	Y	Q	Q	Q	V	A	K	N	A	K	A	M	V	E	V	F	L	E	R	.	G	Y	K	V	V	S	G	G	T	D	N	H	.	.	.	L	F	L	V	D	L	V	D	K	N	L	T	G	.	.	.	K	E	A	D	A
Query Conservation																					.																								.													.	.	.														.	.	.
Alig confidence																					.																								.													.	.	.														.	.	.
Template Conservation
Template Sequence		P	P	C	F	S	I	Y	V	M	G	L	V	L	E	W	I	K	N	N	G	G	A	A	A	M	E	K	L	S	S	I	K	S	Q	T	I	Y	E	I	I	D	N	S	Q	G	F	Y	V	C	P	V	E	P	Q	N	R	S	K	M	N	I	P	F	R	I	G	N	A	K	G	D	D	A	L	E	K	R	F	L	D
Template Known Secondary structure																				T	T																						T	S	T	T	S					S		G	G	G	B		S	S							S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	G	R	A	N	I	T	V	N	K	N	S	V	P	N	D	P	K	S	P	F	V	T	S	G	I	R	V	G	T	P	A	I	T	R	R	G	F	K	E	A	E	A	K	E	L	A	G	W	M	C	D	V	L	D	S	I	N
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.																.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.																.	.	.	.
Template Sequence		K	A	L	E	L	N	M	L	S	L	K	G	H	.	.	.	.	.	.	.	.	R	S	V	G	G	I	R	A	S	L	Y	N	A	V	T	.	.	.	.	I	E	D	V	Q	K	L	A	A	F	M	K	K	F	L	E	M	H	Q
Template Known Secondary structure						T	T			S		B			.	.	.	.	.	.	.	.	T	T	T		S							T	T	S		.	.	.	.
Template Predicted Secondary structure															.	.	.	.	.	.	.	.																.	.	.	.
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.									.	.	.	.	340	.	.	.	.	.	.	.	.	.	350					.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions