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Job DescriptionP0A825
Confidence99.97%DateThu Jan 5 11:06:42 GMT 2012
Rank105Aligned Residues333
% Identity15%Templatec3dr4B_
PDB info PDB header:transferaseChain: B: PDB Molecule:putative perosamine synthetase; PDBTitle: gdp-perosamine synthase k186a mutant from caulobacter2 crescentus with bound sugar ligand
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   35....40.........50.........60.........70.........80.........90.........100......... 110...
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Query Sequence  SENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGADYANVQPHSGSQANFAVYTAL. LEPG
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Template Sequence  AAPRLDGNERDYVLECMDTTWISSVG. . . . . . . . . . . . RFIVEFEKAFADYCGVKHA. IACNNGTTALHLALVAMGIGPG
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   10.........20.........30..... ....40.........50.... .....60.........70......
 
   114.....120.........130.........140.........150.........160.........170.........180.........190...
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Query Sequence  DTVLGMNLAHGGHLTHGSPVNFSGKLYNIVPYGIDATGHIDYADLEKQAKEHKPKMIIGGFSAYSGVVDWAKMREIADSI
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Template Sequence  DEVIVPSLTYI. . . ASANSVTYCGATPVLVDNDPRT. FNLDAAKLEALIT. . PRTKAIMPVHLYGQICDMDPILEVARRH
Template Known Secondary structure 
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T...TT

B
TTT.
SB
GGGTGGG

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GGG



T
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   77..80....... ..90.........100......... 110.........120.. .......130.........140.........150
 
   194.....200.........210.........220.........230.........240.........250...... ...260.......
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Query Sequence  GAYLFVDMAHVAGLVAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLILAKGGSEELYKKLNSAV. . . . . . FPGGQGGPLMH
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Template Sequence  NLLVIEDAAEAVGATYRGKKSGSLGDCATFSFFGNAIITTGEGGMITTNDDDLAAKMRLLRGQGMDPNRRYWFPIVGFNY
Template Known Secondary structure  T

TT
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   151........160.........170.........180.........190.........200.........210.........220.........230
 
   268.270.........280.........290.........300.........310 .........320.........330.........340
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Query Sequence  VIAGKAVALKEAMEPEFKTYQQQVAKNAKAMVEVFLERGYKVV. . . . . . . SGGTDNHLFLVDLVDKNLTGKEADAALGRA
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Template Sequence  RMTNIQAAIGLAQLERVDEHLAARERVVGWYEQKLARLGNRVTKPHVALTGRHVFWMYTVRLGEGLSTTRDQVIKDLDAL
Template Known Secondary structure  B

TGGGGGGG




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   231........240.........250.........260.........270.........280.........290.........300.........310
 
   341........350........ .360.........370.........380.........390
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Query Sequence  NITVNKNSVPNDPKSPFV. . . . . . . . . . . . . . TSGIRVGTPAITRRGFKEAEAKELAGWMCDVL
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Template Sequence  GIESRPVFHPMHIMPPYAHLATDDLKIAEACGVDGLNLPTHAGLT. . . . EADIDRVIAALDQVL
Template Known Secondary structure  TB





GGGSGGGGGG

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   311........320.........330.........340.........350..... ....360.........370
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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