Job Description P0A825 Confidence 99.95% Date Thu Jan 5 11:06:42 GMT 2012 Rank 162 Aligned Residues 359 % Identity 13% Template c3d6kB_ PDB info PDB header:transferase Chain: B: PDB Molecule:putative aminotransferase; PDBTitle: the crystal structure of a putative aminotransferase from2 corynebacterium diphtheriae Resolution 2.00 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.					.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																																																.	.	.	.
Query SS confidence																																																.	.	.	.
Query Sequence		Q	A	M	E	Q	E	K	V	R	Q	E	E	H	I	E	L	I	A	S	E	N	Y	T	S	P	R	V	M	Q	A	Q	G	S	Q	L	T	N	K	Y	A	E	G	Y	P	G	K	.	.	.	.	R	Y	Y	G	G	C	E	Y	V	D	I	V	E	Q	L	A	I	D	R	A	K	E	L	F	G	A	D	Y	A	N
Query Conservation																																																.	.	.	.
Alig confidence																																																.	.	.	.												.	.	.	.
Template Conservation																																																															.	.	.	.
Template Sequence		E	V	T	A	K	Y	A	E	L	K	A	K	N	L	S	L	D	L	T	R	G	K	P	S	A	E	Q	L	D	L	S	N	D	L	L	S	L	P	G	G	D	F	R	T	K	D	G	V	D	C	R	N	Y	G	G	L	L	G	I	A	D	.	.	.	.	I	R	E	L	W	A	E	A	L	G	L	P	A	D	L
Template Known Secondary structure													T						S				S								T	T	G	G	G	G	G		S	T	T			B		T	T			B	T	T	S	S			S	S					.	.	.	.										T			G	G	G
Template Predicted Secondary structure																																																															.	.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.					.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		93	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.															.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure								.											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	Q	P	H	S	G	.	S	Q	A	N	F	A	V	Y	T	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	E	P	G	D	T	V	L	G	M	N	L	A	H	G	G	H	L	T	H	G	S	P	V	N	F	S	G	K	L	Y	N	I	V	P	Y	G	I	D	A	T	G	H	I	D	Y	A	D
Query Conservation								.											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.											.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.																						.	.	.
Template Conservation																																																	.	.	.																						.	.	.
Template Sequence		V	V	A	Q	D	G	S	S	L	N	I	X	F	D	L	I	S	W	S	Y	T	W	G	N	N	D	S	S	R	P	W	S	A	E	E	K	V	K	W	L	C	P	V	P	G	Y	D	.	.	.	R	H	F	T	I	T	E	H	F	G	F	E	X	I	N	V	P	X	T	D	E	.	.	.	G	P	D	X	G	V
Template Known Secondary structure						S	S																			T	T		S	S		G	G	G	S	S									S				.	.	.									T	T										T	T	.	.	.
Template Predicted Secondary structure																																																	.	.	.																						.	.	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.				140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160				.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.				.	.	.	.	.	180	.	.				.	.	.	.	.	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.											.	.	.	220
Predicted Secondary structure																			.	.	.									.	.	.												.																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.									.	.	.												.																								.	.	.	.	.	.	.	.	.	.
Query Sequence		L	E	K	Q	A	K	E	H	K	P	K	M	I	I	G	G	F	.	.	.	S	A	Y	S	G	V	V	D	.	.	.	W	A	K	M	R	E	I	A	D	S	I	.	G	A	Y	L	F	V	D	M	A	H	V	A	G	L	V	A	A	G	V	Y	P	N	P	.	.	.	.	.	.	.	.	.	.	V	P	H	A
Query Conservation																			.	.	.									.	.	.												.																								.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.									.	.	.												.																								.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	R	E	L	V	K	D	P	Q	V	K	G	X	W	T	V	P	V	F	G	N	P	T	G	V	T	F	S	E	Q	T	C	R	E	L	A	E	X	S	T	A	A	P	D	F	R	I	V	W	D	N	A	Y	A	L	H	T	L	S	D	E	F	P	I	V	H	N	V	I	E	F	A	Q	A	A	G	N	P	N	R
Template Known Secondary structure						T	T	S	T	T									S	S		T	T	T																		S	S	T	T								T	T	T	T		B	S	S	S																T		T	T
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		221	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.			.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure													.																																											.	.
Query SS confidence													.																																											.	.
Query Sequence		H	V	V	T	T	T	T	H	K	T	L	.	A	G	P	R	G	G	L	I	L	A	K	G	G	S	E	E	L	Y	K	K	L	N	S	A	V	F	P	G	G	Q	G	G	P	L	M	H	V	I	A	G	K	A	.	.	V	A	L	K	E	A	M	E	P	E	F	K	T	Y	Q	Q	Q	V	A	K	N	A	K	A
Query Conservation													.																																											.	.
Alig confidence													.																																											.	.
Template Conservation
Template Sequence		F	W	F	X	S	S	T	S	K	I	T	H	A	G	S	G	V	S	F	F	A	S	S	K	E	N	I	E	W	Y	A	S	H	A	N	V	R	G	I	G	P	N	K	L	N	Q	L	A	H	A	Q	F	F	G	D	V	A	G	L	K	A	H	X	L	K	H	A	A	S	L	A	P	K	F	E	R	V	L	E	I
Template Known Secondary structure								S	T	T	T	S		T	T	S	S																							S																S
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	V	E	V	F	L	E	R	G	Y	K	V	V	S	G	G	T	D	N	H	L	F	L	V	D	L	V	D	K	N	L	T	G	K	E	A	D	A	A	L	G	R	A	N	I	T	V	N	K	N	S	V	P	N	D	P	K	S	P	F	V	T	S	G	I	R	V	G	T	P	A	I	T	R	R	G	F	K	E	A
Query Conservation
Alig confidence																															.	.																																											.	.	.	.	.
Template Conservation																															.	.																																											.	.	.	.	.
Template Sequence		L	D	S	R	L	S	E	Y	G	V	A	K	W	T	S	P	T	G	G	Y	F	I	S	V	D	V	V	P	G	.	.	T	A	S	R	V	V	E	L	A	K	E	A	G	I	A	L	T	G	A	G	S	S	F	P	L	H	N	D	P	N	N	E	N	I	R	L	A	P	S	L	P	P	.	.	.	.	.	V	A
Template Known Secondary structure							G	G	G		S							S	B	S	S							S	T	T	.	.												T	T						T	T	T	T	S	G	G	G			T	T	S								S	S	S		.	.	.	.	.
Template Predicted Secondary structure																															.	.																																											.	.	.	.	.
Template SS confidence
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.			.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.						.	.
		378	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	K	E	L	A	G	W	M	C	D	V	L	D	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	L	E	V	A	X	D	G	F	A	T	C	V	L	X
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions