Job Description P0A825 Confidence 99.96% Date Thu Jan 5 11:06:42 GMT 2012 Rank 134 Aligned Residues 354 % Identity 12% Template c3cbfA_ PDB info PDB header:transferase Chain: A: PDB Molecule:alpha-aminodipate aminotransferase; PDBTitle: crystal structure of lysn, alpha-aminoadipate2 aminotransferase, from thermus thermophilus hb27 Resolution 1.67 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100
Predicted Secondary structure																																																																															.
Query SS confidence																																																																															.
Query Sequence		E	K	V	R	Q	E	E	H	I	E	L	I	A	S	E	N	Y	T	S	P	R	V	M	Q	A	Q	G	S	Q	L	T	N	K	Y	A	E	G	Y	P	G	K	R	Y	Y	G	G	C	E	Y	V	D	I	V	E	Q	L	A	I	D	R	A	K	E	L	F	G	A	D	Y	A	N	V	Q	P	H	S	G	.	S	Q
Query Conservation																																																																															.
Alig confidence																																																						.	.	.	.																						.
Template Conservation																																																						.	.	.	.
Template Sequence		K	L	T	Q	R	P	G	I	L	S	F	A	G	G	L	P	A	P	E	L	F	P	K	E	E	A	A	E	A	A	A	R	I	L	R	E	K	G	E	V	A	L	Q	Y	S	P	T	E	G	Y	A	P	.	.	.	.	L	R	A	F	V	A	E	W	I	G	V	R	P	E	E	V	L	I	T	T	G	S	Q	Q
Template Known Secondary structure					T	S	T	T					S	S					G	G	G	S																					T	S				T	T					.	.	.	.										T	S		G	G	G					S	S
Template Predicted Secondary structure																																																						.	.	.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.					.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	F	A	V	Y	T	A	L	L	E	P	G	D	T	V	L	G	M	N	L	A	H	G	G	H	L	T	H	G	S	P	V	N	F	S	G	K	L	Y	N	I	V	P	Y	G	I	D	A	T	G	H	I	D	Y	A	D	L	E	K	Q	A	K	E	H	K	P	K	M	I	I	G	G	F	S	A	Y	S	G	V
Query Conservation
Alig confidence																										.	.	.
Template Conservation																										.	.	.
Template Sequence		A	L	D	L	V	G	K	V	F	L	D	E	G	S	P	V	L	L	E	A	P	S	Y	M	.	.	.	G	A	I	Q	A	F	R	L	Q	G	P	R	F	L	T	V	P	A	G	E	E	G	P	D	L	D	A	L	E	E	V	L	K	R	E	R	P	R	F	L	Y	L	I	P	S	F	Q	N	P	T	G	G	L
Template Known Secondary structure													T	T								S				.	.	.								T	T											T	T																	S							B	S		T	T	T			B
Template Predicted Secondary structure																										.	.	.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.				.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		181	.				.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.								.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure				.	.	.																																			.	.	.	.	.	.	.
Query SS confidence				.	.	.																																			.	.	.	.	.	.	.
Query Sequence		V	D	.	.	.	W	A	K	M	R	E	I	A	D	S	I	G	A	Y	L	F	V	D	M	A	H	V	A	G	L	V	A	A	G	V	Y	P	N	P	.	.	.	.	.	.	.	V	P	H	A	H	V	V	T	T	T	T	H	K	T	L	A	G	P	R	G	G	L	I	L	A	K	G	G	S	E	E	L	Y	K
Query Conservation				.	.	.																																			.	.	.	.	.	.	.
Alig confidence				.	.	.																																			.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	P	L	P	A	R	K	R	L	L	Q	M	V	M	E	R	G	L	V	V	V	E	D	D	A	Y	R	E	L	Y	F	G	E	A	R	L	P	S	L	F	E	L	A	R	E	A	G	Y	P	G	V	I	Y	L	G	S	F	S	K	V	L	S	P	G	L	R	V	A	F	A	V	A	H	P	E	A	L	Q	K	L
Template Known Secondary structure																		T								T	T	T	T		B		S	S														T										S	T	T	T	T		S	T	T
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.				.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.
Query SS confidence																																																								.	.	.
Query Sequence		K	L	N	S	A	V	F	P	G	G	Q	G	G	P	L	M	H	V	I	A	G	K	A	V	A	L	K	E	A	M	E	P	E	F	K	T	Y	Q	Q	Q	V	A	K	N	A	K	A	M	V	E	V	F	L	E	.	.	.	R	G	Y	K	V	V	S	G	G	T	D	N	H	L	F	L	V	D	L	V	D	K	N
Query Conservation																																																								.	.	.
Alig confidence									.	.	.																																													.	.	.											.									.
Template Conservation									.	.	.																																																										.									.
Template Sequence		V	Q	A	K	Q	G	A	.	.	.	D	L	H	T	P	M	L	N	Q	M	L	V	H	E	L	L	K	E	G	F	S	E	R	L	E	R	V	R	R	V	Y	R	E	K	A	Q	A	M	L	H	A	L	D	R	E	V	P	K	E	V	R	Y	T	R	P	K	G	.	G	M	F	V	W	M	E	L	.	P	K	G
Template Known Secondary structure									.	.	.		S	S														T	T	T																											S		T	T	S						S	B	.	S	S							.		T	T
Template Predicted Secondary structure									.	.	.																																																										.									.
Template SS confidence
		260	.	.	.	.	.	.				.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.		.	.	.	.	.	.	330	.		.	.	.
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	G	K	E	A	D	A	A	L	G	R	A	N	I	T	V	N	K	N	S	V	P	N	D	P	K	S	P	F	V	T	S	G	I	R	V	G	T	P	A	I	T	R	R	G	F	K	E	A	E	A	K	E	L	A	G	W	M	C	D	V	L	D	S	I	N
Query Conservation
Alig confidence																														.	.														.	.	.	.	.
Template Conservation																														.	.														.	.	.	.	.
Template Sequence		L	S	A	E	G	L	F	R	R	A	L	E	E	N	V	A	F	V	P	G	G	P	F	F	A	N	G	G	.	.	G	E	N	T	L	R	L	S	Y	A	T	L	D	.	.	.	.	.	R	E	G	I	A	E	G	V	R	R	L	G	R	A	L	K	G	L	L
Template Known Secondary structure														T	T						S	G	G	G		T	T	S		.	.		T	T							S	S	S		.	.	.	.	.
Template Predicted Secondary structure																														.	.														.	.	.	.	.
Template SS confidence
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.			.	.	.	.	.	.	.	370	.	.	.	.	.						.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions