Job Description P0A825 Confidence 99.82% Date Thu Jan 5 11:06:42 GMT 2012 Rank 232 Aligned Residues 325 % Identity 12% Template c3bwnF_ PDB info PDB header:transferase Chain: F: PDB Molecule:l-tryptophan aminotransferase; PDBTitle: l-tryptophan aminotransferase Resolution 2.25 Å

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		28	.	30	.	.	.	.	.	.		.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.				.	.	90	.	.	.	.	.	.	.	.		.	100
Predicted Secondary structure											.						.																												.																				.	.	.												.
Query SS confidence											.						.																												.																				.	.	.												.
Query Sequence		E	H	I	E	L	I	A	S	E	.	N	Y	T	S	P	.	R	V	M	Q	A	Q	G	S	Q	L	T	N	K	Y	A	E	G	Y	P	G	K	R	Y	Y	G	G	C	.	E	Y	V	D	I	V	E	Q	L	A	I	D	R	A	K	E	L	F	G	.	.	.	A	D	Y	A	N	V	Q	P	H	S	G	.	S	Q
Query Conservation											.						.																												.																				.	.	.												.
Alig confidence											.						.																												.																				.	.	.												.
Template Conservation
Template Sequence		F	V	V	N	L	D	H	G	D	P	T	A	Y	E	E	Y	W	R	K	M	G	D	R	C	T	V	T	I	R	G	C	D	L	M	S	Y	F	S	D	M	T	N	L	C	W	F	L	E	P	E	L	E	D	A	I	K	D	L	H	G	V	V	G	N	A	A	T	E	D	R	Y	I	V	V	G	T	G	S	T	Q
Template Known Secondary structure		S					S	S				G	G	G								G	G	G	G						T	T	T	T		S	S		S		T	T	S	S	S	T	T	S																	S	B			T	T	S
Template Predicted Secondary structure
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.					.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.		.
Predicted Secondary structure																	.	.	.	.																																																												.
Query SS confidence																	.	.	.	.																																																												.
Query Sequence		A	N	F	A	V	Y	T	A	L	L	E	P	G	D	T	.	.	.	.	V	L	G	M	N	L	A	H	G	G	H	L	T	H	G	S	P	V	N	F	S	G	K	L	Y	N	I	V	P	Y	G	I	D	A	T	G	H	I	D	Y	A	D	L	E	K	Q	A	K	E	H	K	P	K	M	I	I	G	G	F	.	S
Query Conservation																	.	.	.	.																																																												.
Alig confidence																	.	.	.	.										.	.	.																						.	.	.	.	.	.	.	.	.	.	.																.
Template Conservation																														.	.	.																						.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	C	Q	A	A	V	H	A	L	S	S	L	A	R	S	Q	P	V	S	V	V	A	A	A	P	F	Y	S	.	.	.	T	Y	V	E	E	T	T	Y	V	R	S	G	M	Y	K	W	E	G	D	A	W	.	.	.	.	.	.	.	.	.	.	.	G	F	D	K	K	G	P	Y	I	E	L	V	T	S	P	N	N
Template Known Secondary structure														S	S	S	S	S							S	S				.	.	.								T	T			T	T							S	T	.	.	.	.	.	.	.	.	.	.	.	T				S	S								S	S		T
Template Predicted Secondary structure																														.	.	.																						.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130				.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.												.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.			.	.	.	.	.	.		.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure																																																											.	.							.
Query SS confidence																																																											.	.							.
Query Sequence		A	Y	S	G	V	V	D	W	A	K	M	R	E	I	A	D	S	I	G	A	Y	L	F	V	D	M	A	H	V	A	G	L	V	A	A	G	V	Y	P	N	P	V	P	H	A	H	V	V	T	T	T	T	H	K	T	L	A	.	.	G	P	R	G	G	L	.	I	L	A	K	G	G	S	E	E	L	Y	K	K	L
Query Conservation																																																											.	.							.
Alig confidence									.	.	.	.	.	.	.	.	.																						.	.	.																		.	.							.
Template Conservation									.	.	.	.	.	.	.	.	.																						.	.	.
Template Sequence		P	D	G	T	I	R	E	.	.	.	.	.	.	.	.	.	T	V	V	A	K	V	I	H	D	F	A	Y	Y	W	P	H	Y	T	P	I	T	.	.	.	R	R	Q	D	H	D	I	M	L	F	T	F	S	K	I	T	G	H	A	G	S	R	I	G	W	A	L	V	K	D	K	E	V	A	K	K	M	V	E	Y
Template Known Secondary structure		T	T						.	.	.	.	.	.	.	.	.											T	T		S	T	T	T	S				.	.	.	S		B			S													G	G	G
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.																						.	.	.
Template SS confidence
		169	170	.	.	.	.	.										.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.				.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.						.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.
Query SS confidence																															.	.	.	.	.
Query Sequence		N	S	A	V	F	P	G	G	Q	G	G	P	L	M	H	V	I	A	G	K	A	V	A	L	K	E	A	M	E	.	.	.	.	.	P	E	F	K	T	Y	Q	Q	Q	V	A	K	N	A	K	A	M	V	E	V	F	L	E	R	G	Y	K	V	V	S	G	G	T	D	N	H	L	F	L	V	D	L	V	D	K	N
Query Conservation																															.	.	.	.	.
Alig confidence																															.	.	.	.	.
Template Conservation
Template Sequence		I	I	V	N	S	I	G	V	S	K	E	S	Q	V	R	T	A	K	I	L	N	V	L	K	E	T	C	K	S	E	S	E	S	E	N	F	F	K	Y	G	R	E	M	M	K	N	R	W	E	K	L	R	E	V	V	K	E	S	D	A	F	T	L	P	K	Y	P	E	A	F	C	N	Y	F	G	K	S	L	E	S
Template Known Secondary structure							S	S																					T			S	T	T	T	S																						T	S	S	S												T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		328										.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.
Query Sequence		L	.	.	.	.	.	.	.	.	.	T	G	K	E	A	D	A	A	L	G	R	A	N	I	T	V	N	K	N	S	V	P	N	D	P	K	S	P	F	V	T	S	G	I	R	V	G	T	P	A	I	T	R	R	G	F	K	E	A	E	A	K	E	L	A	G	W	M	C	D	V
Query Conservation			.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.																										.	.	.	.	.									.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.									.	.	.	.	.	.
Template Sequence		Y	P	A	F	A	W	L	G	T	K	E	E	T	D	L	V	S	E	L	R	R	H	K	V	M	S	R	A	G	E	R	C	G	S	D	.	.	.	.	.	K	K	H	V	R	V	S	M	.	.	.	.	.	.	L	S	R	E	D	V	F	N	V	F	L	E	R	L	A	N	M
Template Known Secondary structure				S							S	S	S									T	T	T						T	G	G	G	T	S		.	.	.	.	.	T	T						S	.	.	.	.	.	.		S															T
Template Predicted Secondary structure																																					.	.	.	.	.									.	.	.	.	.	.
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.						.	360	.	.	.	.	.	.							.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions