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Job DescriptionP0A825
Confidence99.87%DateThu Jan 5 11:06:42 GMT 2012
Rank223Aligned Residues344
% Identity15%Templatec3a8uX_
PDB info PDB header:transferaseChain: X: PDB Molecule:omega-amino acid--pyruvate aminotransferase; PDBTitle: crystal structure of omega-amino acid:pyruvate aminotransferase
Resolution1.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  QEEHIELIAS. . ENYT. . . SPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGADYANVQPH. SGS
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Template Sequence  GRKVYDSLSGLWTCGAGHTRKEIQEAVAKQL. STLDYSPG. . . . . . . FQYGHPLSFQLAEKITDLTPGNLNHVFFTDSGS
Template Known Secondary structure 

TTT
TT
BS
T.TT
S


S.......SS


TTSSTTSS
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   4950.........60.........70......... 80....... ..90.........100.........110.........120
 
   100.........110. ........120.........130......... 140.........150...
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Query Sequence  QANFAVYTALLE. . . . . . . . PGDTVLGMNLAHGGHLTHGSPVNFSGKL. . . . . . . . . . . . YNIVPYGIDATGHI. . . . . .
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Template Sequence  ECALTAVKMVRAYWRLKGQATKTKMIGRARGYHG. . VNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPK
Template Known Secondary structure  TT
TT

TT



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TTT


S
S




GGGTT
SSS
S
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   121........130.........140.........150.... .....160.........170.........180.........190........
 
   154.....160.........170.... .....180.. .......190.........200.... .....210........
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Query Sequence  . . . . . . . . DYADLEKQAKEHKPKMIIGGF. . SAYSGVVD. . . . WAKMREIADSIGAYLFVDMAHV. AGLVAAGVYPNPVP
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Template Sequence  EGGIALADELLKLIELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGSMFGADSFG
Template Known Secondary structure  SS
GGG
SSBTTTT
B


TTT

TTTTTTTTSSSST
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   199200.........210.........220.........230.........240.........250.........260.........270........
 
   219220.........230.........240.........250...... ...260.........270.........280.........290.....
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Query Sequence  . HAHVVTTTTHKTLAGPRGGLILAKGGSEELYKKLNSAV. . FPGGQGGPLMHVIAGKAVALKEAMEPEFKTYQQQVAKNA
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Template Sequence  VTPDLMCIAKQVTNGAIPMGAVIASTEIYQTFMNQPTPEYAVEFPHGYTYSAHPVACAAGLAALCLLQKENLVQSVAEVA
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S
GGGGTTSS

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TTS
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TTTT
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   279280.........290.........300.........310.........320.........330.........340.........350........
 
   296...300.........310.........320......... 330.........340.........350.........360.........
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Query Sequence  KAMVEVFLERGYKVVSGGTDNHLFLVDLVDKNLT. . . . . . GKEADAALGRANITVNKNSVPNDPKSPFVTSGIRVGTPAI
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Template Sequence  PHFEKALHGIKGAKNVIDIRNFGLAGAIQIAPRDGDAIVRPFEAGMALWKAGFYVRFGG. . . . . . . . . . . DTLQFGPTFN
Template Known Secondary structure  TTTTSTTTT

BTTBSST
T...........T


TT
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   359360.........370.........380.........390.........400.........410....... ..420.......
 
   370.........380.........390....
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Query Sequence  TRRGFKEAEAKELAGWMCDVLDSIN
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Template Sequence  SK. . . . PQDLDRLFDAVGEVLNKLL
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   428. 430.........440........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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