Job Description P0A825 Confidence 100.00% Date Thu Jan 5 11:06:42 GMT 2012 Rank 20 Aligned Residues 342 % Identity 19% Template c3a2bA_ PDB info PDB header:transferase Chain: A: PDB Molecule:serine palmitoyltransferase; PDBTitle: crystal structure of serine palmitoyltransferase from sphingobacterium2 multivorum with substrate l-serine Resolution 2.30 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40					.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																		.	.	.	.
Query SS confidence																		.	.	.	.
Query Sequence		R	Q	E	E	H	I	E	L	I	A	S	E	N	Y	T	S	.	.	.	.	P	R	V	M	Q	A	Q	G	S	Q	L	T	N	K	Y	A	E	G	Y	P	G	K	R	Y	Y	G	G	C	E	Y	V	D	I	V	E	Q	L	A	I	D	R	A	K	E	L	F	G	A	D	Y	A	N	V	Q	P	H	S	G	S	Q
Query Conservation																		.	.	.	.
Alig confidence										.								.	.	.	.												.																		.	.	.																				.
Template Conservation										.																							.																		.	.	.																				.
Template Sequence		D	G	R	R	V	L	M	F	.	G	S	N	S	Y	L	G	L	T	T	D	T	R	I	I	K	A	A	Q	D	A	L	.	E	K	Y	G	T	G	C	A	G	S	R	F	L	N	G	T	L	.	.	.	D	I	H	V	E	L	E	E	K	L	S	A	Y	V	G	K	E	A	A	.	I	L	F	S	T	G	F	Q
Template Known Secondary structure		T	T							.	S		S		T	T		G	G	G													.					S				S	B	T	T	T	T				.	.	.															T		S			.				S	S
Template Predicted Secondary structure										.																							.																		.	.	.																				.
Template SS confidence
		42	.	.	.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.				.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.		.	.	.	.	.
Predicted Secondary structure																																																																												.
Query SS confidence																																																																												.
Query Sequence		A	N	F	A	V	Y	T	A	L	L	E	P	G	D	T	V	L	G	M	N	L	A	H	G	G	H	L	T	H	G	S	P	V	N	F	S	G	K	L	Y	N	I	V	P	Y	G	I	D	A	T	G	H	I	D	Y	A	D	L	E	K	Q	A	K	E	H	K	P	K	M	I	I	G	G	F	.	S	A	Y	S	G
Query Conservation																																																																												.
Alig confidence																										.	.	.																				.	.	.																										.
Template Conservation																										.	.	.																				.	.	.
Template Sequence		S	N	L	G	P	L	S	C	L	M	G	R	N	D	Y	I	L	L	D	E	R	D	H	A	.	.	.	S	I	I	D	G	S	R	L	S	F	S	K	V	I	K	Y	G	H	N	.	.	.	N	M	E	D	L	R	A	K	L	S	R	L	P	E	D	S	A	K	L	I	C	T	D	G	I	F	S	M	E	G	D
Template Known Secondary structure										S	S		T	T							T	T				.	.	.									S	S	S							T	T	.	.	.											T	S		S	S	S								S	B		T	T	T
Template Predicted Secondary structure																										.	.	.																				.	.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.				140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.				.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.						.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.
Query SS confidence																																					.	.	.	.	.
Query Sequence		V	V	D	W	A	K	M	R	E	I	A	D	S	I	G	A	Y	L	F	V	D	M	A	H	V	A	G	L	V	A	A	G	V	Y	P	.	.	.	.	.	N	P	V	P	H	A	H	V	V	T	T	T	T	H	K	T	L	A	G	P	R	G	G	L	I	L	A	K	G	G	S	E	E	L	Y	K	K	L	N	S
Query Conservation																																					.	.	.	.	.
Alig confidence																																					.	.	.	.	.																		.
Template Conservation																																																											.
Template Sequence		I	V	N	L	P	E	L	T	S	I	A	N	E	F	D	A	A	V	M	V	D	D	A	H	S	L	G	V	I	G	H	K	G	A	G	T	A	S	H	F	G	L	N	D	D	V	D	L	I	M	G	T	F	S	K	S	L	.	A	S	L	G	G	F	V	A	G	D	A	D	V	I	D	F	L	K	H	N	A	R
Template Known Secondary structure		B														T								T	T	T	T	T	T	S	S	G	G	G								T		G	G	G		S						S	S	S	T	T	.		S	S
Template Predicted Secondary structure																																																											.
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.		.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	F	P	G	G	Q	G	G	P	L	M	H	V	I	A	G	K	A	V	A	L	K	E	A	M	E	P	E	F	K	T	Y	Q	Q	Q	V	A	K	N	A	K	A	M	V	E	V	F	L	E	R	G	Y	K	V	V	S	G	G	T	D	N	H	L	F	L	V	D	L	V	D	K	N	L	T	G	K	E	A	D
Query Conservation
Alig confidence																												.	.	.	.																													.	.										.
Template Conservation																												.	.	.	.																													.	.										.
Template Sequence		S	V	M	F	S	A	S	M	T	P	A	S	V	A	S	T	L	K	A	L	E	I	I	Q	N	E	.	.	.	.	P	E	H	I	E	K	L	W	K	N	T	D	Y	A	K	A	Q	L	L	D	H	G	F	D	L	G	A	T	.	.	E	S	P	I	L	P	I	F	I	.	R	S	N	E	K	T	F	W	V	T
Template Known Secondary structure					S	S	B																					.	.	.	.	T																				T	T			B		S		.	.		S	S							.
Template Predicted Secondary structure																												.	.	.	.																													.	.										.
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.					.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.			.	.	.	.	.	.	.	330	.		.	.	.	.	.	.	.	.	340	.
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	L	G	R	A	N	I	T	V	N	K	N	S	V	P	N	D	P	K	S	P	F	V	T	S	G	I	R	V	G	T	P	A	I	T	R	R	G	F	K	E	A	E	A	K	E	L	A	G	W	M	C	D	V	L	D	S	I
Query Conservation
Alig confidence																							.	.	.														.	.	.	.
Template Conservation																							.	.	.														.	.	.	.
Template Sequence		K	M	L	Q	D	D	G	V	F	V	N	P	V	V	S	P	A	V	P	A	E	.	.	.	E	S	L	I	R	F	S	L	M	A	T	H	T	.	.	.	.	Y	D	Q	I	D	E	A	I	E	K	M	V	K	V	F	K	Q	A
Template Known Secondary structure							T	T								T	T	T	S		G	G	.	.	.	G									T	T			.	.	.	.
Template Predicted Secondary structure																							.	.	.														.	.	.	.
Template SS confidence
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.				.	.	.	.	.	.	.	370	.	.	.	.	.					.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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